Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10005 | 30238;30239;30240 | chr2:178704357;178704356;178704355 | chr2:179569084;179569083;179569082 |
N2AB | 9688 | 29287;29288;29289 | chr2:178704357;178704356;178704355 | chr2:179569084;179569083;179569082 |
N2A | 8761 | 26506;26507;26508 | chr2:178704357;178704356;178704355 | chr2:179569084;179569083;179569082 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2075505818 | None | 0.984 | None | 0.623 | 0.278 | 0.331876078066 | gnomAD-4.0.0 | 1.59101E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85791E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1639 | likely_benign | 0.1576 | benign | -0.654 | Destabilizing | 0.64 | D | 0.433 | neutral | None | None | None | None | N |
T/C | 0.7745 | likely_pathogenic | 0.8174 | pathogenic | -0.37 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
T/D | 0.6512 | likely_pathogenic | 0.6274 | pathogenic | -0.046 | Destabilizing | 0.919 | D | 0.534 | neutral | None | None | None | None | N |
T/E | 0.5209 | ambiguous | 0.4842 | ambiguous | -0.085 | Destabilizing | 0.919 | D | 0.521 | neutral | None | None | None | None | N |
T/F | 0.4874 | ambiguous | 0.5127 | ambiguous | -0.904 | Destabilizing | 0.996 | D | 0.712 | prob.delet. | None | None | None | None | N |
T/G | 0.5627 | ambiguous | 0.5748 | pathogenic | -0.861 | Destabilizing | 0.851 | D | 0.557 | neutral | None | None | None | None | N |
T/H | 0.4701 | ambiguous | 0.483 | ambiguous | -1.165 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/I | 0.2611 | likely_benign | 0.2671 | benign | -0.209 | Destabilizing | 0.984 | D | 0.623 | neutral | None | None | None | None | N |
T/K | 0.3473 | ambiguous | 0.3347 | benign | -0.6 | Destabilizing | 0.919 | D | 0.533 | neutral | None | None | None | None | N |
T/L | 0.1978 | likely_benign | 0.2114 | benign | -0.209 | Destabilizing | 0.919 | D | 0.537 | neutral | None | None | None | None | N |
T/M | 0.1364 | likely_benign | 0.1348 | benign | 0.103 | Stabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | N |
T/N | 0.2212 | likely_benign | 0.2096 | benign | -0.438 | Destabilizing | 0.968 | D | 0.487 | neutral | None | None | None | None | N |
T/P | 0.2577 | likely_benign | 0.2797 | benign | -0.326 | Destabilizing | 0.026 | N | 0.292 | neutral | None | None | None | None | N |
T/Q | 0.3914 | ambiguous | 0.3828 | ambiguous | -0.666 | Destabilizing | 0.988 | D | 0.638 | neutral | None | None | None | None | N |
T/R | 0.3065 | likely_benign | 0.2957 | benign | -0.314 | Destabilizing | 0.976 | D | 0.631 | neutral | None | None | None | None | N |
T/S | 0.2086 | likely_benign | 0.2036 | benign | -0.705 | Destabilizing | 0.103 | N | 0.162 | neutral | None | None | None | None | N |
T/V | 0.2317 | likely_benign | 0.2413 | benign | -0.326 | Destabilizing | 0.919 | D | 0.455 | neutral | None | None | None | None | N |
T/W | 0.8344 | likely_pathogenic | 0.8552 | pathogenic | -0.839 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
T/Y | 0.5349 | ambiguous | 0.5667 | pathogenic | -0.599 | Destabilizing | 0.996 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.