Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10007 | 30244;30245;30246 | chr2:178704351;178704350;178704349 | chr2:179569078;179569077;179569076 |
N2AB | 9690 | 29293;29294;29295 | chr2:178704351;178704350;178704349 | chr2:179569078;179569077;179569076 |
N2A | 8763 | 26512;26513;26514 | chr2:178704351;178704350;178704349 | chr2:179569078;179569077;179569076 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs1168557032 | None | 0.81 | None | 0.531 | 0.156 | 0.263612267334 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 7.32654E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1335 | likely_benign | 0.134 | benign | -0.557 | Destabilizing | 0.201 | N | 0.539 | neutral | None | None | None | None | N |
T/C | 0.6924 | likely_pathogenic | 0.7315 | pathogenic | -0.265 | Destabilizing | 0.026 | N | 0.469 | neutral | None | None | None | None | N |
T/D | 0.6276 | likely_pathogenic | 0.6527 | pathogenic | -0.08 | Destabilizing | 0.447 | N | 0.456 | neutral | None | None | None | None | N |
T/E | 0.3957 | ambiguous | 0.4005 | ambiguous | -0.119 | Destabilizing | 0.048 | N | 0.421 | neutral | None | None | None | None | N |
T/F | 0.3826 | ambiguous | 0.4159 | ambiguous | -0.773 | Destabilizing | 0.85 | D | 0.571 | neutral | None | None | None | None | N |
T/G | 0.5575 | ambiguous | 0.5921 | pathogenic | -0.769 | Destabilizing | 0.447 | N | 0.499 | neutral | None | None | None | None | N |
T/H | 0.3587 | ambiguous | 0.401 | ambiguous | -1.06 | Destabilizing | 0.992 | D | 0.575 | neutral | None | None | None | None | N |
T/I | 0.1806 | likely_benign | 0.2058 | benign | -0.099 | Destabilizing | 0.681 | D | 0.519 | neutral | None | None | None | None | N |
T/K | 0.2987 | likely_benign | 0.3301 | benign | -0.614 | Destabilizing | 0.617 | D | 0.457 | neutral | None | None | None | None | N |
T/L | 0.1589 | likely_benign | 0.1837 | benign | -0.099 | Destabilizing | 0.103 | N | 0.506 | neutral | None | None | None | None | N |
T/M | 0.1208 | likely_benign | 0.1275 | benign | 0.164 | Stabilizing | 0.103 | N | 0.468 | neutral | None | None | None | None | N |
T/N | 0.24 | likely_benign | 0.27 | benign | -0.395 | Destabilizing | 0.81 | D | 0.531 | neutral | None | None | None | None | N |
T/P | 0.5506 | ambiguous | 0.5797 | pathogenic | -0.22 | Destabilizing | 0.896 | D | 0.536 | neutral | None | None | None | None | N |
T/Q | 0.2899 | likely_benign | 0.3075 | benign | -0.603 | Destabilizing | 0.85 | D | 0.537 | neutral | None | None | None | None | N |
T/R | 0.2246 | likely_benign | 0.2434 | benign | -0.328 | Destabilizing | 0.85 | D | 0.536 | neutral | None | None | None | None | N |
T/S | 0.1748 | likely_benign | 0.1924 | benign | -0.633 | Destabilizing | 0.016 | N | 0.496 | neutral | None | None | None | None | N |
T/V | 0.1527 | likely_benign | 0.17 | benign | -0.22 | Destabilizing | 0.447 | N | 0.537 | neutral | None | None | None | None | N |
T/W | 0.7766 | likely_pathogenic | 0.8009 | pathogenic | -0.74 | Destabilizing | 0.992 | D | 0.608 | neutral | None | None | None | None | N |
T/Y | 0.4766 | ambiguous | 0.5231 | ambiguous | -0.502 | Destabilizing | 0.92 | D | 0.567 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.