Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10009 | 30250;30251;30252 | chr2:178704345;178704344;178704343 | chr2:179569072;179569071;179569070 |
N2AB | 9692 | 29299;29300;29301 | chr2:178704345;178704344;178704343 | chr2:179569072;179569071;179569070 |
N2A | 8765 | 26518;26519;26520 | chr2:178704345;178704344;178704343 | chr2:179569072;179569071;179569070 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.193 | None | 0.597 | 0.243 | 0.626364337782 | gnomAD-4.0.0 | 1.59086E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85747E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1222 | likely_benign | 0.1434 | benign | -0.994 | Destabilizing | 0.001 | N | 0.329 | neutral | None | None | None | None | N |
T/C | 0.7317 | likely_pathogenic | 0.7871 | pathogenic | -0.624 | Destabilizing | 0.944 | D | 0.615 | neutral | None | None | None | None | N |
T/D | 0.5487 | ambiguous | 0.5665 | pathogenic | -0.848 | Destabilizing | 0.388 | N | 0.59 | neutral | None | None | None | None | N |
T/E | 0.3725 | ambiguous | 0.3888 | ambiguous | -0.764 | Destabilizing | 0.388 | N | 0.583 | neutral | None | None | None | None | N |
T/F | 0.3255 | likely_benign | 0.3802 | ambiguous | -0.709 | Destabilizing | 0.69 | D | 0.623 | neutral | None | None | None | None | N |
T/G | 0.5035 | ambiguous | 0.5692 | pathogenic | -1.347 | Destabilizing | 0.241 | N | 0.625 | neutral | None | None | None | None | N |
T/H | 0.3521 | ambiguous | 0.4189 | ambiguous | -1.556 | Destabilizing | 0.981 | D | 0.649 | neutral | None | None | None | None | N |
T/I | 0.162 | likely_benign | 0.2054 | benign | -0.111 | Destabilizing | 0.193 | N | 0.597 | neutral | None | None | None | None | N |
T/K | 0.3127 | likely_benign | 0.3553 | ambiguous | -0.933 | Destabilizing | 0.324 | N | 0.591 | neutral | None | None | None | None | N |
T/L | 0.1496 | likely_benign | 0.1809 | benign | -0.111 | Destabilizing | 0.116 | N | 0.587 | neutral | None | None | None | None | N |
T/M | 0.1116 | likely_benign | 0.1273 | benign | 0.107 | Stabilizing | 0.818 | D | 0.627 | neutral | None | None | None | None | N |
T/N | 0.1781 | likely_benign | 0.1982 | benign | -1.121 | Destabilizing | 0.388 | N | 0.601 | neutral | None | None | None | None | N |
T/P | 0.4974 | ambiguous | 0.6242 | pathogenic | -0.372 | Destabilizing | 0.627 | D | 0.623 | neutral | None | None | None | None | N |
T/Q | 0.3084 | likely_benign | 0.3432 | ambiguous | -1.123 | Destabilizing | 0.818 | D | 0.621 | neutral | None | None | None | None | N |
T/R | 0.2592 | likely_benign | 0.2991 | benign | -0.835 | Destabilizing | 0.627 | D | 0.619 | neutral | None | None | None | None | N |
T/S | 0.1603 | likely_benign | 0.1774 | benign | -1.365 | Destabilizing | 0.003 | N | 0.339 | neutral | None | None | None | None | N |
T/V | 0.1695 | likely_benign | 0.1992 | benign | -0.372 | Destabilizing | 0.002 | N | 0.365 | neutral | None | None | None | None | N |
T/W | 0.7602 | likely_pathogenic | 0.8058 | pathogenic | -0.728 | Destabilizing | 0.981 | D | 0.69 | prob.neutral | None | None | None | None | N |
T/Y | 0.3957 | ambiguous | 0.4506 | ambiguous | -0.478 | Destabilizing | 0.818 | D | 0.649 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.