Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10012 | 30259;30260;30261 | chr2:178704336;178704335;178704334 | chr2:179569063;179569062;179569061 |
N2AB | 9695 | 29308;29309;29310 | chr2:178704336;178704335;178704334 | chr2:179569063;179569062;179569061 |
N2A | 8768 | 26527;26528;26529 | chr2:178704336;178704335;178704334 | chr2:179569063;179569062;179569061 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/V | None | None | 0.925 | None | 0.68 | 0.27 | 0.502005994047 | gnomAD-4.0.0 | 1.36827E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79878E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9951 | likely_pathogenic | 0.9942 | pathogenic | -3.747 | Highly Destabilizing | 0.985 | D | 0.723 | prob.delet. | None | None | None | None | N |
F/C | 0.9811 | likely_pathogenic | 0.9779 | pathogenic | -2.256 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
F/D | 0.999 | likely_pathogenic | 0.999 | pathogenic | -3.883 | Highly Destabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
F/E | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -3.69 | Highly Destabilizing | 0.999 | D | 0.846 | deleterious | None | None | None | None | N |
F/G | 0.9971 | likely_pathogenic | 0.9967 | pathogenic | -4.118 | Highly Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
F/H | 0.9925 | likely_pathogenic | 0.9925 | pathogenic | -2.604 | Highly Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
F/I | 0.9182 | likely_pathogenic | 0.9068 | pathogenic | -2.482 | Highly Destabilizing | 0.925 | D | 0.651 | neutral | None | None | None | None | N |
F/K | 0.9988 | likely_pathogenic | 0.9987 | pathogenic | -2.504 | Highly Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
F/L | 0.9867 | likely_pathogenic | 0.9852 | pathogenic | -2.482 | Highly Destabilizing | 0.031 | N | 0.321 | neutral | None | None | None | None | N |
F/M | 0.958 | likely_pathogenic | 0.9558 | pathogenic | -2.189 | Highly Destabilizing | 0.991 | D | 0.74 | deleterious | None | None | None | None | N |
F/N | 0.9962 | likely_pathogenic | 0.9959 | pathogenic | -2.92 | Highly Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
F/P | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -2.922 | Highly Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
F/Q | 0.9985 | likely_pathogenic | 0.9984 | pathogenic | -2.914 | Highly Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
F/R | 0.9971 | likely_pathogenic | 0.9969 | pathogenic | -1.915 | Destabilizing | 0.999 | D | 0.846 | deleterious | None | None | None | None | N |
F/S | 0.9962 | likely_pathogenic | 0.9956 | pathogenic | -3.462 | Highly Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
F/T | 0.996 | likely_pathogenic | 0.9958 | pathogenic | -3.179 | Highly Destabilizing | 0.996 | D | 0.789 | deleterious | None | None | None | None | N |
F/V | 0.9272 | likely_pathogenic | 0.9172 | pathogenic | -2.922 | Highly Destabilizing | 0.925 | D | 0.68 | prob.neutral | None | None | None | None | N |
F/W | 0.9496 | likely_pathogenic | 0.9468 | pathogenic | -0.94 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
F/Y | 0.6933 | likely_pathogenic | 0.6711 | pathogenic | -1.583 | Destabilizing | 0.993 | D | 0.654 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.