Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10014 | 30265;30266;30267 | chr2:178704330;178704329;178704328 | chr2:179569057;179569056;179569055 |
N2AB | 9697 | 29314;29315;29316 | chr2:178704330;178704329;178704328 | chr2:179569057;179569056;179569055 |
N2A | 8770 | 26533;26534;26535 | chr2:178704330;178704329;178704328 | chr2:179569057;179569056;179569055 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs745949099 | 0.002 | 0.76 | None | 0.488 | 0.1 | 0.614608367865 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/L | rs745949099 | 0.002 | 0.76 | None | 0.488 | 0.1 | 0.614608367865 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs745949099 | 0.002 | 0.76 | None | 0.488 | 0.1 | 0.614608367865 | gnomAD-4.0.0 | 3.84235E-06 | None | None | None | None | N | None | 5.07322E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6534 | likely_pathogenic | 0.6037 | pathogenic | -1.681 | Destabilizing | 0.939 | D | 0.492 | neutral | None | None | None | None | N |
V/C | 0.9614 | likely_pathogenic | 0.9528 | pathogenic | -1.15 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
V/D | 0.9399 | likely_pathogenic | 0.9077 | pathogenic | -1.591 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
V/E | 0.8028 | likely_pathogenic | 0.7445 | pathogenic | -1.482 | Destabilizing | 0.997 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/F | 0.5071 | ambiguous | 0.429 | ambiguous | -1.111 | Destabilizing | 0.986 | D | 0.68 | prob.neutral | None | None | None | None | N |
V/G | 0.8632 | likely_pathogenic | 0.8124 | pathogenic | -2.114 | Highly Destabilizing | 0.997 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/H | 0.9402 | likely_pathogenic | 0.9097 | pathogenic | -1.652 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
V/I | 0.0953 | likely_benign | 0.1026 | benign | -0.542 | Destabilizing | 0.046 | N | 0.262 | neutral | None | None | None | None | N |
V/K | 0.8302 | likely_pathogenic | 0.7684 | pathogenic | -1.348 | Destabilizing | 0.993 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/L | 0.4646 | ambiguous | 0.438 | ambiguous | -0.542 | Destabilizing | 0.76 | D | 0.488 | neutral | None | None | None | None | N |
V/M | 0.3792 | ambiguous | 0.3659 | ambiguous | -0.468 | Destabilizing | 0.986 | D | 0.669 | neutral | None | None | None | None | N |
V/N | 0.8895 | likely_pathogenic | 0.8512 | pathogenic | -1.349 | Destabilizing | 0.998 | D | 0.76 | deleterious | None | None | None | None | N |
V/P | 0.9812 | likely_pathogenic | 0.9765 | pathogenic | -0.888 | Destabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | N |
V/Q | 0.8179 | likely_pathogenic | 0.7595 | pathogenic | -1.355 | Destabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | N |
V/R | 0.7949 | likely_pathogenic | 0.7233 | pathogenic | -0.999 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
V/S | 0.7962 | likely_pathogenic | 0.7424 | pathogenic | -1.963 | Destabilizing | 0.993 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/T | 0.6556 | likely_pathogenic | 0.625 | pathogenic | -1.715 | Destabilizing | 0.953 | D | 0.617 | neutral | None | None | None | None | N |
V/W | 0.9823 | likely_pathogenic | 0.9731 | pathogenic | -1.42 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
V/Y | 0.9119 | likely_pathogenic | 0.8777 | pathogenic | -1.067 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.