Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10020 | 30283;30284;30285 | chr2:178704312;178704311;178704310 | chr2:179569039;179569038;179569037 |
N2AB | 9703 | 29332;29333;29334 | chr2:178704312;178704311;178704310 | chr2:179569039;179569038;179569037 |
N2A | 8776 | 26551;26552;26553 | chr2:178704312;178704311;178704310 | chr2:179569039;179569038;179569037 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs764487564 | -0.974 | 0.012 | None | 0.515 | 0.115 | 0.351830644314 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/D | rs764487564 | -0.974 | 0.012 | None | 0.515 | 0.115 | 0.351830644314 | gnomAD-4.0.0 | 6.84135E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2071 | likely_benign | 0.3393 | benign | -0.734 | Destabilizing | 0.012 | N | 0.457 | neutral | None | None | None | None | N |
E/C | 0.9072 | likely_pathogenic | 0.9664 | pathogenic | -0.514 | Destabilizing | 0.676 | D | 0.588 | neutral | None | None | None | None | N |
E/D | 0.2471 | likely_benign | 0.3847 | ambiguous | -0.88 | Destabilizing | 0.012 | N | 0.515 | neutral | None | None | None | None | N |
E/F | 0.8285 | likely_pathogenic | 0.9314 | pathogenic | 0.037 | Stabilizing | 0.356 | N | 0.598 | neutral | None | None | None | None | N |
E/G | 0.3267 | likely_benign | 0.5459 | ambiguous | -1.089 | Destabilizing | 0.012 | N | 0.531 | neutral | None | None | None | None | N |
E/H | 0.4987 | ambiguous | 0.7157 | pathogenic | -0.029 | Destabilizing | 0.356 | N | 0.598 | neutral | None | None | None | None | N |
E/I | 0.3744 | ambiguous | 0.574 | pathogenic | 0.233 | Stabilizing | 0.214 | N | 0.611 | neutral | None | None | None | None | N |
E/K | 0.119 | likely_benign | 0.2166 | benign | -0.462 | Destabilizing | None | N | 0.213 | neutral | None | None | None | None | N |
E/L | 0.4534 | ambiguous | 0.6971 | pathogenic | 0.233 | Stabilizing | 0.072 | N | 0.557 | neutral | None | None | None | None | N |
E/M | 0.4809 | ambiguous | 0.6797 | pathogenic | 0.483 | Stabilizing | 0.356 | N | 0.579 | neutral | None | None | None | None | N |
E/N | 0.3122 | likely_benign | 0.5311 | ambiguous | -1.042 | Destabilizing | 0.038 | N | 0.555 | neutral | None | None | None | None | N |
E/P | 0.954 | likely_pathogenic | 0.9849 | pathogenic | -0.068 | Destabilizing | 0.072 | N | 0.588 | neutral | None | None | None | None | N |
E/Q | 0.1115 | likely_benign | 0.1825 | benign | -0.879 | Destabilizing | None | N | 0.218 | neutral | None | None | None | None | N |
E/R | 0.2292 | likely_benign | 0.3977 | ambiguous | -0.062 | Destabilizing | 0.038 | N | 0.569 | neutral | None | None | None | None | N |
E/S | 0.249 | likely_benign | 0.4196 | ambiguous | -1.311 | Destabilizing | None | N | 0.206 | neutral | None | None | None | None | N |
E/T | 0.2301 | likely_benign | 0.3865 | ambiguous | -1.005 | Destabilizing | 0.038 | N | 0.559 | neutral | None | None | None | None | N |
E/V | 0.2259 | likely_benign | 0.3664 | ambiguous | -0.068 | Destabilizing | 0.055 | N | 0.561 | neutral | None | None | None | None | N |
E/W | 0.9363 | likely_pathogenic | 0.9751 | pathogenic | 0.355 | Stabilizing | 0.864 | D | 0.603 | neutral | None | None | None | None | N |
E/Y | 0.7093 | likely_pathogenic | 0.8737 | pathogenic | 0.301 | Stabilizing | 0.356 | N | 0.605 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.