Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10026 | 30301;30302;30303 | chr2:178704294;178704293;178704292 | chr2:179569021;179569020;179569019 |
N2AB | 9709 | 29350;29351;29352 | chr2:178704294;178704293;178704292 | chr2:179569021;179569020;179569019 |
N2A | 8782 | 26569;26570;26571 | chr2:178704294;178704293;178704292 | chr2:179569021;179569020;179569019 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | rs1327825232 | None | 0.324 | None | 0.34 | 0.144 | 0.376745185316 | gnomAD-4.0.0 | 6.15722E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09454E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5155 | ambiguous | 0.5711 | pathogenic | 0.091 | Stabilizing | 0.116 | N | 0.381 | neutral | None | None | None | None | N |
R/C | 0.3686 | ambiguous | 0.3765 | ambiguous | -0.127 | Destabilizing | 0.981 | D | 0.374 | neutral | None | None | None | None | N |
R/D | 0.7409 | likely_pathogenic | 0.7772 | pathogenic | -0.098 | Destabilizing | 0.241 | N | 0.389 | neutral | None | None | None | None | N |
R/E | 0.3677 | ambiguous | 0.4055 | ambiguous | -0.038 | Destabilizing | 0.008 | N | 0.195 | neutral | None | None | None | None | N |
R/F | 0.679 | likely_pathogenic | 0.7101 | pathogenic | -0.173 | Destabilizing | 0.932 | D | 0.366 | neutral | None | None | None | None | N |
R/G | 0.4153 | ambiguous | 0.4735 | ambiguous | -0.087 | Destabilizing | 0.324 | N | 0.391 | neutral | None | None | None | None | N |
R/H | 0.1451 | likely_benign | 0.1418 | benign | -0.614 | Destabilizing | 0.818 | D | 0.31 | neutral | None | None | None | None | N |
R/I | 0.2781 | likely_benign | 0.2744 | benign | 0.518 | Stabilizing | 0.773 | D | 0.38 | neutral | None | None | None | None | N |
R/K | 0.0969 | likely_benign | 0.112 | benign | -0.005 | Destabilizing | None | N | 0.159 | neutral | None | None | None | None | N |
R/L | 0.3644 | ambiguous | 0.3815 | ambiguous | 0.518 | Stabilizing | 0.388 | N | 0.386 | neutral | None | None | None | None | N |
R/M | 0.3125 | likely_benign | 0.3335 | benign | 0.038 | Stabilizing | 0.932 | D | 0.335 | neutral | None | None | None | None | N |
R/N | 0.5655 | likely_pathogenic | 0.624 | pathogenic | 0.132 | Stabilizing | 0.388 | N | 0.302 | neutral | None | None | None | None | N |
R/P | 0.9638 | likely_pathogenic | 0.9718 | pathogenic | 0.396 | Stabilizing | 0.818 | D | 0.363 | neutral | None | None | None | None | N |
R/Q | 0.1125 | likely_benign | 0.1163 | benign | 0.078 | Stabilizing | 0.241 | N | 0.329 | neutral | None | None | None | None | N |
R/S | 0.5662 | likely_pathogenic | 0.6374 | pathogenic | -0.136 | Destabilizing | 0.193 | N | 0.368 | neutral | None | None | None | None | N |
R/T | 0.3106 | likely_benign | 0.3419 | ambiguous | 0.051 | Stabilizing | 0.324 | N | 0.34 | neutral | None | None | None | None | N |
R/V | 0.3795 | ambiguous | 0.4018 | ambiguous | 0.396 | Stabilizing | 0.388 | N | 0.399 | neutral | None | None | None | None | N |
R/W | 0.3217 | likely_benign | 0.3473 | ambiguous | -0.3 | Destabilizing | 0.981 | D | 0.415 | neutral | None | None | None | None | N |
R/Y | 0.552 | ambiguous | 0.5782 | pathogenic | 0.124 | Stabilizing | 0.932 | D | 0.359 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.