Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10027 | 30304;30305;30306 | chr2:178704291;178704290;178704289 | chr2:179569018;179569017;179569016 |
N2AB | 9710 | 29353;29354;29355 | chr2:178704291;178704290;178704289 | chr2:179569018;179569017;179569016 |
N2A | 8783 | 26572;26573;26574 | chr2:178704291;178704290;178704289 | chr2:179569018;179569017;179569016 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | None | None | 0.103 | 0.086 | 0.31077124679 | gnomAD-4.0.0 | 1.59086E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
I/T | rs751219454 | -0.865 | 0.007 | None | 0.297 | 0.08 | 0.597704877147 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.85E-06 | 0 |
I/T | rs751219454 | -0.865 | 0.007 | None | 0.297 | 0.08 | 0.597704877147 | gnomAD-4.0.0 | 1.59087E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8575E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3041 | likely_benign | 0.4066 | ambiguous | -1.241 | Destabilizing | None | N | 0.133 | neutral | None | None | None | None | N |
I/C | 0.6887 | likely_pathogenic | 0.7824 | pathogenic | -0.703 | Destabilizing | 0.245 | N | 0.314 | neutral | None | None | None | None | N |
I/D | 0.6598 | likely_pathogenic | 0.7471 | pathogenic | -0.592 | Destabilizing | 0.044 | N | 0.459 | neutral | None | None | None | None | N |
I/E | 0.4611 | ambiguous | 0.5262 | ambiguous | -0.583 | Destabilizing | 0.009 | N | 0.381 | neutral | None | None | None | None | N |
I/F | 0.1718 | likely_benign | 0.1953 | benign | -0.76 | Destabilizing | 0.017 | N | 0.231 | neutral | None | None | None | None | N |
I/G | 0.6304 | likely_pathogenic | 0.7696 | pathogenic | -1.541 | Destabilizing | 0.009 | N | 0.374 | neutral | None | None | None | None | N |
I/H | 0.3832 | ambiguous | 0.4741 | ambiguous | -0.681 | Destabilizing | 0.138 | N | 0.417 | neutral | None | None | None | None | N |
I/K | 0.2278 | likely_benign | 0.2907 | benign | -0.826 | Destabilizing | 0.009 | N | 0.337 | neutral | None | None | None | None | N |
I/L | 0.0844 | likely_benign | 0.1066 | benign | -0.503 | Destabilizing | None | N | 0.103 | neutral | None | None | None | None | N |
I/M | 0.102 | likely_benign | 0.1225 | benign | -0.491 | Destabilizing | 0.057 | N | 0.282 | neutral | None | None | None | None | N |
I/N | 0.2301 | likely_benign | 0.298 | benign | -0.693 | Destabilizing | 0.065 | N | 0.481 | neutral | None | None | None | None | N |
I/P | 0.3565 | ambiguous | 0.4589 | ambiguous | -0.717 | Destabilizing | None | N | 0.231 | neutral | None | None | None | None | N |
I/Q | 0.3076 | likely_benign | 0.4002 | ambiguous | -0.815 | Destabilizing | 0.002 | N | 0.275 | neutral | None | None | None | None | N |
I/R | 0.1936 | likely_benign | 0.2456 | benign | -0.297 | Destabilizing | None | N | 0.251 | neutral | None | None | None | None | N |
I/S | 0.2916 | likely_benign | 0.3831 | ambiguous | -1.262 | Destabilizing | 0.007 | N | 0.291 | neutral | None | None | None | None | N |
I/T | 0.2654 | likely_benign | 0.3541 | ambiguous | -1.136 | Destabilizing | 0.007 | N | 0.297 | neutral | None | None | None | None | N |
I/V | 0.0868 | likely_benign | 0.1051 | benign | -0.717 | Destabilizing | None | N | 0.116 | neutral | None | None | None | None | N |
I/W | 0.7101 | likely_pathogenic | 0.7573 | pathogenic | -0.851 | Destabilizing | 0.55 | D | 0.393 | neutral | None | None | None | None | N |
I/Y | 0.4371 | ambiguous | 0.4983 | ambiguous | -0.611 | Destabilizing | None | N | 0.218 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.