Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10029 | 30310;30311;30312 | chr2:178704285;178704284;178704283 | chr2:179569012;179569011;179569010 |
N2AB | 9712 | 29359;29360;29361 | chr2:178704285;178704284;178704283 | chr2:179569012;179569011;179569010 |
N2A | 8785 | 26578;26579;26580 | chr2:178704285;178704284;178704283 | chr2:179569012;179569011;179569010 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.045 | None | 0.182 | 0.142 | 0.206339911435 | gnomAD-4.0.0 | 1.36827E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31863E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6323 | likely_pathogenic | 0.6074 | pathogenic | 0.014 | Stabilizing | 0.4 | N | 0.293 | neutral | None | None | None | None | N |
K/C | 0.9118 | likely_pathogenic | 0.9301 | pathogenic | -0.471 | Destabilizing | 0.992 | D | 0.429 | neutral | None | None | None | None | N |
K/D | 0.8483 | likely_pathogenic | 0.8161 | pathogenic | -0.296 | Destabilizing | 0.447 | N | 0.301 | neutral | None | None | None | None | N |
K/E | 0.3826 | ambiguous | 0.3375 | benign | -0.283 | Destabilizing | 0.001 | N | 0.114 | neutral | None | None | None | None | N |
K/F | 0.8747 | likely_pathogenic | 0.8677 | pathogenic | -0.245 | Destabilizing | 0.972 | D | 0.395 | neutral | None | None | None | None | N |
K/G | 0.8085 | likely_pathogenic | 0.7988 | pathogenic | -0.148 | Destabilizing | 0.617 | D | 0.345 | neutral | None | None | None | None | N |
K/H | 0.4219 | ambiguous | 0.4275 | ambiguous | -0.248 | Destabilizing | 0.92 | D | 0.327 | neutral | None | None | None | None | N |
K/I | 0.5375 | ambiguous | 0.494 | ambiguous | 0.364 | Stabilizing | 0.896 | D | 0.403 | neutral | None | None | None | None | N |
K/L | 0.4903 | ambiguous | 0.471 | ambiguous | 0.364 | Stabilizing | 0.617 | D | 0.36 | neutral | None | None | None | None | N |
K/M | 0.4185 | ambiguous | 0.3859 | ambiguous | -0.163 | Destabilizing | 0.972 | D | 0.323 | neutral | None | None | None | None | N |
K/N | 0.6547 | likely_pathogenic | 0.6062 | pathogenic | -0.084 | Destabilizing | 0.549 | D | 0.319 | neutral | None | None | None | None | N |
K/P | 0.7279 | likely_pathogenic | 0.7401 | pathogenic | 0.272 | Stabilizing | 0.92 | D | 0.306 | neutral | None | None | None | None | N |
K/Q | 0.189 | likely_benign | 0.1841 | benign | -0.167 | Destabilizing | 0.045 | N | 0.182 | neutral | None | None | None | None | N |
K/R | 0.126 | likely_benign | 0.1243 | benign | -0.129 | Destabilizing | 0.004 | N | 0.214 | neutral | None | None | None | None | N |
K/S | 0.685 | likely_pathogenic | 0.6563 | pathogenic | -0.406 | Destabilizing | 0.617 | D | 0.279 | neutral | None | None | None | None | N |
K/T | 0.35 | ambiguous | 0.321 | benign | -0.264 | Destabilizing | 0.549 | D | 0.311 | neutral | None | None | None | None | N |
K/V | 0.5476 | ambiguous | 0.514 | ambiguous | 0.272 | Stabilizing | 0.766 | D | 0.349 | neutral | None | None | None | None | N |
K/W | 0.8853 | likely_pathogenic | 0.8928 | pathogenic | -0.373 | Destabilizing | 0.992 | D | 0.462 | neutral | None | None | None | None | N |
K/Y | 0.755 | likely_pathogenic | 0.7428 | pathogenic | -0.022 | Destabilizing | 0.972 | D | 0.375 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.