Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10039 | 30340;30341;30342 | chr2:178704255;178704254;178704253 | chr2:179568982;179568981;179568980 |
N2AB | 9722 | 29389;29390;29391 | chr2:178704255;178704254;178704253 | chr2:179568982;179568981;179568980 |
N2A | 8795 | 26608;26609;26610 | chr2:178704255;178704254;178704253 | chr2:179568982;179568981;179568980 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.003 | None | 0.113 | 0.188 | 0.265929055128 | gnomAD-4.0.0 | 1.36828E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79879E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1971 | likely_benign | 0.239 | benign | -0.268 | Destabilizing | 0.047 | N | 0.24 | neutral | None | None | None | None | N |
E/C | 0.9336 | likely_pathogenic | 0.9573 | pathogenic | -0.201 | Destabilizing | 0.983 | D | 0.247 | neutral | None | None | None | None | N |
E/D | 0.2737 | likely_benign | 0.3521 | ambiguous | -0.357 | Destabilizing | 0.101 | N | 0.161 | neutral | None | None | None | None | N |
E/F | 0.8138 | likely_pathogenic | 0.8666 | pathogenic | -0.096 | Destabilizing | 0.836 | D | 0.294 | neutral | None | None | None | None | N |
E/G | 0.2854 | likely_benign | 0.3568 | ambiguous | -0.461 | Destabilizing | 0.101 | N | 0.223 | neutral | None | None | None | None | N |
E/H | 0.6438 | likely_pathogenic | 0.7202 | pathogenic | 0.283 | Stabilizing | 0.836 | D | 0.217 | neutral | None | None | None | None | N |
E/I | 0.4467 | ambiguous | 0.5054 | ambiguous | 0.204 | Stabilizing | 0.264 | N | 0.356 | neutral | None | None | None | None | N |
E/K | 0.2527 | likely_benign | 0.2993 | benign | 0.277 | Stabilizing | 0.003 | N | 0.113 | neutral | None | None | None | None | N |
E/L | 0.5221 | ambiguous | 0.5847 | pathogenic | 0.204 | Stabilizing | 0.129 | N | 0.251 | neutral | None | None | None | None | N |
E/M | 0.5793 | likely_pathogenic | 0.6418 | pathogenic | 0.11 | Stabilizing | 0.836 | D | 0.263 | neutral | None | None | None | None | N |
E/N | 0.405 | ambiguous | 0.5117 | ambiguous | -0.095 | Destabilizing | 0.001 | N | 0.113 | neutral | None | None | None | None | N |
E/P | 0.9644 | likely_pathogenic | 0.9755 | pathogenic | 0.067 | Stabilizing | 0.593 | D | 0.283 | neutral | None | None | None | None | N |
E/Q | 0.1953 | likely_benign | 0.2169 | benign | -0.046 | Destabilizing | 0.021 | N | 0.237 | neutral | None | None | None | None | N |
E/R | 0.4035 | ambiguous | 0.4748 | ambiguous | 0.566 | Stabilizing | 0.129 | N | 0.124 | neutral | None | None | None | None | N |
E/S | 0.2616 | likely_benign | 0.335 | benign | -0.241 | Destabilizing | 0.004 | N | 0.165 | neutral | None | None | None | None | N |
E/T | 0.2925 | likely_benign | 0.3486 | ambiguous | -0.081 | Destabilizing | 0.001 | N | 0.148 | neutral | None | None | None | None | N |
E/V | 0.2935 | likely_benign | 0.3387 | benign | 0.067 | Stabilizing | 0.213 | N | 0.286 | neutral | None | None | None | None | N |
E/W | 0.9441 | likely_pathogenic | 0.9635 | pathogenic | 0.044 | Stabilizing | 0.983 | D | 0.243 | neutral | None | None | None | None | N |
E/Y | 0.7815 | likely_pathogenic | 0.8437 | pathogenic | 0.141 | Stabilizing | 0.836 | D | 0.323 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.