Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10040 | 30343;30344;30345 | chr2:178704252;178704251;178704250 | chr2:179568979;179568978;179568977 |
N2AB | 9723 | 29392;29393;29394 | chr2:178704252;178704251;178704250 | chr2:179568979;179568978;179568977 |
N2A | 8796 | 26611;26612;26613 | chr2:178704252;178704251;178704250 | chr2:179568979;179568978;179568977 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Y | None | None | 0.051 | None | 0.153 | 0.177 | 0.166414681773 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4827 | ambiguous | 0.5554 | ambiguous | 0.31 | Stabilizing | 0.842 | D | 0.295 | neutral | None | None | None | None | N |
H/C | 0.4766 | ambiguous | 0.5502 | ambiguous | 0.833 | Stabilizing | 0.998 | D | 0.419 | neutral | None | None | None | None | N |
H/D | 0.1563 | likely_benign | 0.1886 | benign | -0.008 | Destabilizing | 0.012 | N | 0.192 | neutral | None | None | None | None | N |
H/E | 0.3293 | likely_benign | 0.3912 | ambiguous | 0.014 | Stabilizing | 0.016 | N | 0.137 | neutral | None | None | None | None | N |
H/F | 0.551 | ambiguous | 0.591 | pathogenic | 0.903 | Stabilizing | 0.904 | D | 0.359 | neutral | None | None | None | None | N |
H/G | 0.3223 | likely_benign | 0.3796 | ambiguous | 0.025 | Stabilizing | 0.842 | D | 0.303 | neutral | None | None | None | None | N |
H/I | 0.7679 | likely_pathogenic | 0.8164 | pathogenic | 1.037 | Stabilizing | 0.974 | D | 0.403 | neutral | None | None | None | None | N |
H/K | 0.3748 | ambiguous | 0.3925 | ambiguous | 0.255 | Stabilizing | 0.728 | D | 0.258 | neutral | None | None | None | None | N |
H/L | 0.2651 | likely_benign | 0.3042 | benign | 1.037 | Stabilizing | 0.801 | D | 0.337 | neutral | None | None | None | None | N |
H/M | 0.694 | likely_pathogenic | 0.759 | pathogenic | 0.836 | Stabilizing | 0.998 | D | 0.365 | neutral | None | None | None | None | N |
H/N | 0.078 | likely_benign | 0.0901 | benign | 0.329 | Stabilizing | 0.669 | D | 0.279 | neutral | None | None | None | None | N |
H/P | 0.3807 | ambiguous | 0.4295 | ambiguous | 0.821 | Stabilizing | 0.966 | D | 0.385 | neutral | None | None | None | None | N |
H/Q | 0.2528 | likely_benign | 0.2908 | benign | 0.426 | Stabilizing | 0.669 | D | 0.355 | neutral | None | None | None | None | N |
H/R | 0.1994 | likely_benign | 0.2094 | benign | -0.357 | Destabilizing | 0.801 | D | 0.344 | neutral | None | None | None | None | N |
H/S | 0.3201 | likely_benign | 0.3719 | ambiguous | 0.449 | Stabilizing | 0.842 | D | 0.285 | neutral | None | None | None | None | N |
H/T | 0.487 | ambiguous | 0.5639 | ambiguous | 0.567 | Stabilizing | 0.842 | D | 0.323 | neutral | None | None | None | None | N |
H/V | 0.6687 | likely_pathogenic | 0.7256 | pathogenic | 0.821 | Stabilizing | 0.842 | D | 0.375 | neutral | None | None | None | None | N |
H/W | 0.6496 | likely_pathogenic | 0.6806 | pathogenic | 0.87 | Stabilizing | 0.993 | D | 0.369 | neutral | None | None | None | None | N |
H/Y | 0.1586 | likely_benign | 0.1758 | benign | 1.179 | Stabilizing | 0.051 | N | 0.153 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.