Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10041 | 30346;30347;30348 | chr2:178704249;178704248;178704247 | chr2:179568976;179568975;179568974 |
N2AB | 9724 | 29395;29396;29397 | chr2:178704249;178704248;178704247 | chr2:179568976;179568975;179568974 |
N2A | 8797 | 26614;26615;26616 | chr2:178704249;178704248;178704247 | chr2:179568976;179568975;179568974 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.939 | None | 0.585 | 0.238 | 0.290590437066 | gnomAD-4.0.0 | 1.59087E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85752E-06 | 0 | 0 |
K/T | None | None | 0.17 | None | 0.385 | 0.213 | 0.294206760003 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8186 | likely_pathogenic | 0.8172 | pathogenic | -0.769 | Destabilizing | 0.91 | D | 0.571 | neutral | None | None | None | None | N |
K/C | 0.9074 | likely_pathogenic | 0.9248 | pathogenic | -0.916 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/D | 0.9288 | likely_pathogenic | 0.9212 | pathogenic | -1.196 | Destabilizing | 0.986 | D | 0.661 | neutral | None | None | None | None | N |
K/E | 0.6872 | likely_pathogenic | 0.708 | pathogenic | -1.023 | Destabilizing | 0.939 | D | 0.585 | neutral | None | None | None | None | N |
K/F | 0.9473 | likely_pathogenic | 0.9685 | pathogenic | -0.221 | Destabilizing | 0.993 | D | 0.742 | deleterious | None | None | None | None | N |
K/G | 0.7481 | likely_pathogenic | 0.7579 | pathogenic | -1.192 | Destabilizing | 0.986 | D | 0.672 | neutral | None | None | None | None | N |
K/H | 0.6152 | likely_pathogenic | 0.6689 | pathogenic | -1.629 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/I | 0.9056 | likely_pathogenic | 0.9221 | pathogenic | 0.371 | Stabilizing | 0.982 | D | 0.743 | deleterious | None | None | None | None | N |
K/L | 0.7492 | likely_pathogenic | 0.7805 | pathogenic | 0.371 | Stabilizing | 0.91 | D | 0.66 | neutral | None | None | None | None | N |
K/M | 0.5629 | ambiguous | 0.5958 | pathogenic | 0.222 | Stabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
K/N | 0.7859 | likely_pathogenic | 0.7696 | pathogenic | -1.309 | Destabilizing | 0.982 | D | 0.668 | neutral | None | None | None | None | N |
K/P | 0.9743 | likely_pathogenic | 0.977 | pathogenic | 0.019 | Stabilizing | 0.993 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/Q | 0.4113 | ambiguous | 0.4387 | ambiguous | -1.199 | Destabilizing | 0.991 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/R | 0.1268 | likely_benign | 0.1466 | benign | -1.194 | Destabilizing | 0.969 | D | 0.559 | neutral | None | None | None | None | N |
K/S | 0.8311 | likely_pathogenic | 0.8243 | pathogenic | -1.761 | Destabilizing | 0.91 | D | 0.579 | neutral | None | None | None | None | N |
K/T | 0.5557 | ambiguous | 0.554 | ambiguous | -1.377 | Destabilizing | 0.17 | N | 0.385 | neutral | None | None | None | None | N |
K/V | 0.8682 | likely_pathogenic | 0.8914 | pathogenic | 0.019 | Stabilizing | 0.973 | D | 0.667 | neutral | None | None | None | None | N |
K/W | 0.9376 | likely_pathogenic | 0.964 | pathogenic | -0.29 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/Y | 0.857 | likely_pathogenic | 0.9086 | pathogenic | 0.054 | Stabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.