Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10043 | 30352;30353;30354 | chr2:178704243;178704242;178704241 | chr2:179568970;179568969;179568968 |
N2AB | 9726 | 29401;29402;29403 | chr2:178704243;178704242;178704241 | chr2:179568970;179568969;179568968 |
N2A | 8799 | 26620;26621;26622 | chr2:178704243;178704242;178704241 | chr2:179568970;179568969;179568968 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.92 | None | 0.753 | 0.357 | 0.166414681773 | gnomAD-4.0.0 | 4.77262E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57251E-06 | 0 | 0 |
H/Y | rs989692401 | 0.449 | 0.986 | None | 0.727 | 0.363 | 0.248417906384 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/Y | rs989692401 | 0.449 | 0.986 | None | 0.727 | 0.363 | 0.248417906384 | gnomAD-4.0.0 | 1.59089E-06 | None | None | None | None | N | None | 0 | 2.28624E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.9684 | likely_pathogenic | 0.9782 | pathogenic | -1.781 | Destabilizing | 0.863 | D | 0.757 | deleterious | None | None | None | None | N |
H/C | 0.7872 | likely_pathogenic | 0.85 | pathogenic | -1.121 | Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | N |
H/D | 0.9745 | likely_pathogenic | 0.9819 | pathogenic | -1.707 | Destabilizing | 0.92 | D | 0.803 | deleterious | None | None | None | None | N |
H/E | 0.9607 | likely_pathogenic | 0.9766 | pathogenic | -1.521 | Destabilizing | 0.759 | D | 0.661 | neutral | None | None | None | None | N |
H/F | 0.9178 | likely_pathogenic | 0.9342 | pathogenic | 0.167 | Stabilizing | 0.997 | D | 0.837 | deleterious | None | None | None | None | N |
H/G | 0.9787 | likely_pathogenic | 0.9867 | pathogenic | -2.159 | Highly Destabilizing | 0.969 | D | 0.792 | deleterious | None | None | None | None | N |
H/I | 0.9523 | likely_pathogenic | 0.972 | pathogenic | -0.657 | Destabilizing | 0.997 | D | 0.855 | deleterious | None | None | None | None | N |
H/K | 0.962 | likely_pathogenic | 0.9735 | pathogenic | -1.171 | Destabilizing | 0.884 | D | 0.779 | deleterious | None | None | None | None | N |
H/L | 0.7379 | likely_pathogenic | 0.8067 | pathogenic | -0.657 | Destabilizing | 0.92 | D | 0.806 | deleterious | None | None | None | None | N |
H/M | 0.9492 | likely_pathogenic | 0.968 | pathogenic | -0.956 | Destabilizing | 0.997 | D | 0.8 | deleterious | None | None | None | None | N |
H/N | 0.7304 | likely_pathogenic | 0.8215 | pathogenic | -1.713 | Destabilizing | 0.959 | D | 0.713 | prob.delet. | None | None | None | None | N |
H/P | 0.9867 | likely_pathogenic | 0.9909 | pathogenic | -1.024 | Destabilizing | 0.996 | D | 0.815 | deleterious | None | None | None | None | N |
H/Q | 0.7608 | likely_pathogenic | 0.8468 | pathogenic | -1.308 | Destabilizing | 0.159 | N | 0.425 | neutral | None | None | None | None | N |
H/R | 0.8765 | likely_pathogenic | 0.9134 | pathogenic | -1.323 | Destabilizing | 0.92 | D | 0.753 | deleterious | None | None | None | None | N |
H/S | 0.9154 | likely_pathogenic | 0.9419 | pathogenic | -1.892 | Destabilizing | 0.939 | D | 0.787 | deleterious | None | None | None | None | N |
H/T | 0.9622 | likely_pathogenic | 0.9777 | pathogenic | -1.6 | Destabilizing | 0.969 | D | 0.795 | deleterious | None | None | None | None | N |
H/V | 0.9404 | likely_pathogenic | 0.9635 | pathogenic | -1.024 | Destabilizing | 0.969 | D | 0.817 | deleterious | None | None | None | None | N |
H/W | 0.9205 | likely_pathogenic | 0.9485 | pathogenic | 0.675 | Stabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
H/Y | 0.7086 | likely_pathogenic | 0.7726 | pathogenic | 0.468 | Stabilizing | 0.986 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.