Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10045 | 30358;30359;30360 | chr2:178704237;178704236;178704235 | chr2:179568964;179568963;179568962 |
N2AB | 9728 | 29407;29408;29409 | chr2:178704237;178704236;178704235 | chr2:179568964;179568963;179568962 |
N2A | 8801 | 26626;26627;26628 | chr2:178704237;178704236;178704235 | chr2:179568964;179568963;179568962 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/W | rs776484795 | -1.715 | 1.0 | None | 0.843 | 0.765 | 0.878366613624 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/W | rs776484795 | -1.715 | 1.0 | None | 0.843 | 0.765 | 0.878366613624 | gnomAD-4.0.0 | 3.04479E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.61477E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9693 | likely_pathogenic | 0.9859 | pathogenic | -2.734 | Highly Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/C | 0.9551 | likely_pathogenic | 0.9846 | pathogenic | -2.144 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -3.565 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
L/E | 0.9972 | likely_pathogenic | 0.9981 | pathogenic | -3.249 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
L/F | 0.6649 | likely_pathogenic | 0.8276 | pathogenic | -1.613 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
L/G | 0.9935 | likely_pathogenic | 0.9963 | pathogenic | -3.343 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
L/H | 0.9904 | likely_pathogenic | 0.9951 | pathogenic | -3.091 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/I | 0.3389 | likely_benign | 0.5204 | ambiguous | -0.901 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | N |
L/K | 0.9937 | likely_pathogenic | 0.9952 | pathogenic | -2.121 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
L/M | 0.3576 | ambiguous | 0.5129 | ambiguous | -1.146 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/N | 0.9974 | likely_pathogenic | 0.998 | pathogenic | -2.823 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/P | 0.9992 | likely_pathogenic | 0.9997 | pathogenic | -1.503 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/Q | 0.9869 | likely_pathogenic | 0.9923 | pathogenic | -2.484 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
L/R | 0.9877 | likely_pathogenic | 0.9921 | pathogenic | -2.144 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/S | 0.9974 | likely_pathogenic | 0.999 | pathogenic | -3.385 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/T | 0.9893 | likely_pathogenic | 0.9949 | pathogenic | -2.906 | Highly Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
L/V | 0.4408 | ambiguous | 0.6661 | pathogenic | -1.503 | Destabilizing | 0.999 | D | 0.648 | neutral | None | None | None | None | N |
L/W | 0.9487 | likely_pathogenic | 0.9814 | pathogenic | -2.1 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/Y | 0.9585 | likely_pathogenic | 0.9779 | pathogenic | -1.875 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.