Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10049 | 30370;30371;30372 | chr2:178704225;178704224;178704223 | chr2:179568952;179568951;179568950 |
N2AB | 9732 | 29419;29420;29421 | chr2:178704225;178704224;178704223 | chr2:179568952;179568951;179568950 |
N2A | 8805 | 26638;26639;26640 | chr2:178704225;178704224;178704223 | chr2:179568952;179568951;179568950 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs2075487390 | None | 0.919 | None | 0.595 | 0.298 | 0.18274738541 | gnomAD-4.0.0 | 2.05243E-06 | None | None | None | None | N | None | 2.98686E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7988E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.735 | likely_pathogenic | 0.4957 | ambiguous | -0.422 | Destabilizing | 0.988 | D | 0.684 | prob.neutral | None | None | None | None | N |
D/C | 0.9816 | likely_pathogenic | 0.9398 | pathogenic | 0.011 | Stabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
D/E | 0.6837 | likely_pathogenic | 0.4486 | ambiguous | -0.674 | Destabilizing | 0.958 | D | 0.559 | neutral | None | None | None | None | N |
D/F | 0.9609 | likely_pathogenic | 0.8923 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
D/G | 0.6616 | likely_pathogenic | 0.4009 | ambiguous | -0.662 | Destabilizing | 0.919 | D | 0.595 | neutral | None | None | None | None | N |
D/H | 0.8647 | likely_pathogenic | 0.6663 | pathogenic | -0.872 | Destabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | N |
D/I | 0.9685 | likely_pathogenic | 0.908 | pathogenic | 0.174 | Stabilizing | 0.995 | D | 0.775 | deleterious | None | None | None | None | N |
D/K | 0.9299 | likely_pathogenic | 0.7957 | pathogenic | -0.072 | Destabilizing | 0.991 | D | 0.677 | prob.neutral | None | None | None | None | N |
D/L | 0.9314 | likely_pathogenic | 0.8377 | pathogenic | 0.174 | Stabilizing | 0.995 | D | 0.767 | deleterious | None | None | None | None | N |
D/M | 0.9783 | likely_pathogenic | 0.9366 | pathogenic | 0.598 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
D/N | 0.3143 | likely_benign | 0.1607 | benign | -0.281 | Destabilizing | 0.067 | N | 0.341 | neutral | None | None | None | None | N |
D/P | 0.9915 | likely_pathogenic | 0.9727 | pathogenic | -0.001 | Destabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | N |
D/Q | 0.9067 | likely_pathogenic | 0.7574 | pathogenic | -0.264 | Destabilizing | 0.991 | D | 0.733 | prob.delet. | None | None | None | None | N |
D/R | 0.9193 | likely_pathogenic | 0.7932 | pathogenic | -0.069 | Destabilizing | 0.991 | D | 0.757 | deleterious | None | None | None | None | N |
D/S | 0.5601 | ambiguous | 0.3241 | benign | -0.456 | Destabilizing | 0.938 | D | 0.593 | neutral | None | None | None | None | N |
D/T | 0.8737 | likely_pathogenic | 0.7026 | pathogenic | -0.274 | Destabilizing | 0.991 | D | 0.681 | prob.neutral | None | None | None | None | N |
D/V | 0.903 | likely_pathogenic | 0.7708 | pathogenic | -0.001 | Destabilizing | 0.994 | D | 0.771 | deleterious | None | None | None | None | N |
D/W | 0.9925 | likely_pathogenic | 0.9792 | pathogenic | -0.593 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
D/Y | 0.7781 | likely_pathogenic | 0.5726 | pathogenic | -0.419 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.