Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10064 | 30415;30416;30417 | chr2:178704180;178704179;178704178 | chr2:179568907;179568906;179568905 |
N2AB | 9747 | 29464;29465;29466 | chr2:178704180;178704179;178704178 | chr2:179568907;179568906;179568905 |
N2A | 8820 | 26683;26684;26685 | chr2:178704180;178704179;178704178 | chr2:179568907;179568906;179568905 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 0.427 | None | 0.492 | 0.185 | 0.373357554552 | gnomAD-4.0.0 | 1.36833E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79881E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2032 | likely_benign | 0.3023 | benign | 0.019 | Stabilizing | 0.042 | N | 0.333 | neutral | None | None | None | None | N |
D/C | 0.7496 | likely_pathogenic | 0.8608 | pathogenic | -0.153 | Destabilizing | 0.958 | D | 0.453 | neutral | None | None | None | None | N |
D/E | 0.1947 | likely_benign | 0.2733 | benign | -0.224 | Destabilizing | 0.081 | N | 0.357 | neutral | None | None | None | None | N |
D/F | 0.5825 | likely_pathogenic | 0.7197 | pathogenic | -0.065 | Destabilizing | 0.667 | D | 0.484 | neutral | None | None | None | None | N |
D/G | 0.1273 | likely_benign | 0.1744 | benign | -0.103 | Destabilizing | None | N | 0.132 | neutral | None | None | None | None | N |
D/H | 0.2583 | likely_benign | 0.3685 | ambiguous | 0.517 | Stabilizing | 0.001 | N | 0.162 | neutral | None | None | None | None | N |
D/I | 0.4538 | ambiguous | 0.623 | pathogenic | 0.275 | Stabilizing | 0.667 | D | 0.489 | neutral | None | None | None | None | N |
D/K | 0.3414 | ambiguous | 0.4583 | ambiguous | 0.366 | Stabilizing | 0.22 | N | 0.367 | neutral | None | None | None | None | N |
D/L | 0.4775 | ambiguous | 0.6122 | pathogenic | 0.275 | Stabilizing | 0.22 | N | 0.507 | neutral | None | None | None | None | N |
D/M | 0.6589 | likely_pathogenic | 0.7988 | pathogenic | 0.055 | Stabilizing | 0.958 | D | 0.459 | neutral | None | None | None | None | N |
D/N | 0.0801 | likely_benign | 0.1049 | benign | 0.194 | Stabilizing | None | N | 0.103 | neutral | None | None | None | None | N |
D/P | 0.7969 | likely_pathogenic | 0.8911 | pathogenic | 0.21 | Stabilizing | 0.667 | D | 0.449 | neutral | None | None | None | None | N |
D/Q | 0.3616 | ambiguous | 0.4992 | ambiguous | 0.193 | Stabilizing | 0.22 | N | 0.359 | neutral | None | None | None | None | N |
D/R | 0.4013 | ambiguous | 0.5486 | ambiguous | 0.627 | Stabilizing | 0.22 | N | 0.496 | neutral | None | None | None | None | N |
D/S | 0.1394 | likely_benign | 0.2018 | benign | 0.063 | Stabilizing | 0.002 | N | 0.1 | neutral | None | None | None | None | N |
D/T | 0.263 | likely_benign | 0.3711 | ambiguous | 0.16 | Stabilizing | 0.124 | N | 0.337 | neutral | None | None | None | None | N |
D/V | 0.2995 | likely_benign | 0.4399 | ambiguous | 0.21 | Stabilizing | 0.175 | N | 0.519 | neutral | None | None | None | None | N |
D/W | 0.881 | likely_pathogenic | 0.9253 | pathogenic | -0.026 | Destabilizing | 0.958 | D | 0.486 | neutral | None | None | None | None | N |
D/Y | 0.227 | likely_benign | 0.3065 | benign | 0.159 | Stabilizing | 0.427 | N | 0.492 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.