Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10066 | 30421;30422;30423 | chr2:178704174;178704173;178704172 | chr2:179568901;179568900;179568899 |
N2AB | 9749 | 29470;29471;29472 | chr2:178704174;178704173;178704172 | chr2:179568901;179568900;179568899 |
N2A | 8822 | 26689;26690;26691 | chr2:178704174;178704173;178704172 | chr2:179568901;179568900;179568899 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs370072382 | -0.357 | 0.294 | None | 0.279 | 0.152 | None | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 2.66E-05 | 0 |
E/Q | rs370072382 | -0.357 | 0.294 | None | 0.279 | 0.152 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs370072382 | -0.357 | 0.294 | None | 0.279 | 0.152 | None | gnomAD-4.0.0 | 6.94E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.23821E-05 | 1.09794E-05 | 3.20174E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1911 | likely_benign | 0.27 | benign | -0.469 | Destabilizing | 0.014 | N | 0.357 | neutral | None | None | None | None | N |
E/C | 0.9188 | likely_pathogenic | 0.9565 | pathogenic | 0.038 | Stabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/D | 0.4212 | ambiguous | 0.6896 | pathogenic | -0.499 | Destabilizing | 0.822 | D | 0.623 | neutral | None | None | None | None | N |
E/F | 0.8377 | likely_pathogenic | 0.9181 | pathogenic | -0.369 | Destabilizing | 0.978 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/G | 0.3472 | ambiguous | 0.5027 | ambiguous | -0.705 | Destabilizing | 0.014 | N | 0.389 | neutral | None | None | None | None | N |
E/H | 0.6042 | likely_pathogenic | 0.7717 | pathogenic | -0.381 | Destabilizing | 0.978 | D | 0.641 | neutral | None | None | None | None | N |
E/I | 0.452 | ambiguous | 0.5975 | pathogenic | 0.132 | Stabilizing | 0.956 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/K | 0.224 | likely_benign | 0.3471 | ambiguous | 0.219 | Stabilizing | 0.698 | D | 0.625 | neutral | None | None | None | None | N |
E/L | 0.5432 | ambiguous | 0.7044 | pathogenic | 0.132 | Stabilizing | 0.956 | D | 0.666 | neutral | None | None | None | None | N |
E/M | 0.5246 | ambiguous | 0.6554 | pathogenic | 0.395 | Stabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/N | 0.5181 | ambiguous | 0.7401 | pathogenic | -0.084 | Destabilizing | 0.956 | D | 0.635 | neutral | None | None | None | None | N |
E/P | 0.9652 | likely_pathogenic | 0.9856 | pathogenic | -0.047 | Destabilizing | 0.978 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/Q | 0.1492 | likely_benign | 0.1977 | benign | -0.046 | Destabilizing | 0.294 | N | 0.279 | neutral | None | None | None | None | N |
E/R | 0.3779 | ambiguous | 0.5336 | ambiguous | 0.357 | Stabilizing | 0.956 | D | 0.639 | neutral | None | None | None | None | N |
E/S | 0.2984 | likely_benign | 0.4306 | ambiguous | -0.276 | Destabilizing | 0.754 | D | 0.618 | neutral | None | None | None | None | N |
E/T | 0.2829 | likely_benign | 0.3995 | ambiguous | -0.086 | Destabilizing | 0.86 | D | 0.662 | neutral | None | None | None | None | N |
E/V | 0.2572 | likely_benign | 0.369 | ambiguous | -0.047 | Destabilizing | 0.89 | D | 0.671 | neutral | None | None | None | None | N |
E/W | 0.9461 | likely_pathogenic | 0.9756 | pathogenic | -0.219 | Destabilizing | 0.998 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/Y | 0.7891 | likely_pathogenic | 0.8939 | pathogenic | -0.121 | Destabilizing | 0.993 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.