Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10069 | 30430;30431;30432 | chr2:178704165;178704164;178704163 | chr2:179568892;179568891;179568890 |
N2AB | 9752 | 29479;29480;29481 | chr2:178704165;178704164;178704163 | chr2:179568892;179568891;179568890 |
N2A | 8825 | 26698;26699;26700 | chr2:178704165;178704164;178704163 | chr2:179568892;179568891;179568890 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/E | None | None | 0.988 | None | 0.78 | 0.372 | 0.361958692863 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
A/T | rs1167245039 | None | 0.142 | None | 0.409 | 0.28 | 0.107399877778 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 2.07039E-04 | 0 |
A/T | rs1167245039 | None | 0.142 | None | 0.409 | 0.28 | 0.107399877778 | gnomAD-4.0.0 | 1.31404E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46972E-05 | 2.07039E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8885 | likely_pathogenic | 0.9049 | pathogenic | -1.254 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
A/D | 0.9855 | likely_pathogenic | 0.9883 | pathogenic | -1.917 | Destabilizing | 0.991 | D | 0.817 | deleterious | None | None | None | None | N |
A/E | 0.9808 | likely_pathogenic | 0.9876 | pathogenic | -1.955 | Destabilizing | 0.988 | D | 0.78 | deleterious | None | None | None | None | N |
A/F | 0.9802 | likely_pathogenic | 0.9867 | pathogenic | -1.248 | Destabilizing | 0.995 | D | 0.867 | deleterious | None | None | None | None | N |
A/G | 0.3371 | likely_benign | 0.3598 | ambiguous | -1.274 | Destabilizing | 0.958 | D | 0.601 | neutral | None | None | None | None | N |
A/H | 0.9887 | likely_pathogenic | 0.99 | pathogenic | -1.346 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
A/I | 0.9717 | likely_pathogenic | 0.9828 | pathogenic | -0.535 | Destabilizing | 0.991 | D | 0.819 | deleterious | None | None | None | None | N |
A/K | 0.9889 | likely_pathogenic | 0.9911 | pathogenic | -1.29 | Destabilizing | 0.991 | D | 0.781 | deleterious | None | None | None | None | N |
A/L | 0.9141 | likely_pathogenic | 0.9442 | pathogenic | -0.535 | Destabilizing | 0.938 | D | 0.667 | neutral | None | None | None | None | N |
A/M | 0.9305 | likely_pathogenic | 0.9571 | pathogenic | -0.483 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
A/N | 0.9783 | likely_pathogenic | 0.9837 | pathogenic | -1.132 | Destabilizing | 0.991 | D | 0.832 | deleterious | None | None | None | None | N |
A/P | 0.9964 | likely_pathogenic | 0.9975 | pathogenic | -0.663 | Destabilizing | 0.994 | D | 0.829 | deleterious | None | None | None | None | N |
A/Q | 0.9671 | likely_pathogenic | 0.9742 | pathogenic | -1.37 | Destabilizing | 0.995 | D | 0.852 | deleterious | None | None | None | None | N |
A/R | 0.9615 | likely_pathogenic | 0.9679 | pathogenic | -0.865 | Destabilizing | 0.991 | D | 0.837 | deleterious | None | None | None | None | N |
A/S | 0.267 | likely_benign | 0.3012 | benign | -1.416 | Destabilizing | 0.919 | D | 0.587 | neutral | None | None | None | None | N |
A/T | 0.564 | ambiguous | 0.6762 | pathogenic | -1.373 | Destabilizing | 0.142 | N | 0.409 | neutral | None | None | None | None | N |
A/V | 0.8261 | likely_pathogenic | 0.8816 | pathogenic | -0.663 | Destabilizing | 0.919 | D | 0.615 | neutral | None | None | None | None | N |
A/W | 0.9974 | likely_pathogenic | 0.9983 | pathogenic | -1.553 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
A/Y | 0.9912 | likely_pathogenic | 0.9933 | pathogenic | -1.164 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.