Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10079 | 30460;30461;30462 | chr2:178702652;178702651;178702650 | chr2:179567379;179567378;179567377 |
N2AB | 9762 | 29509;29510;29511 | chr2:178702652;178702651;178702650 | chr2:179567379;179567378;179567377 |
N2A | 8835 | 26728;26729;26730 | chr2:178702652;178702651;178702650 | chr2:179567379;179567378;179567377 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs752672136 | 0.344 | 0.92 | None | 0.293 | 0.287 | 0.238096912614 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
Q/R | rs752672136 | 0.344 | 0.92 | None | 0.293 | 0.287 | 0.238096912614 | gnomAD-4.0.0 | 1.59282E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86257E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.4915 | ambiguous | 0.5158 | ambiguous | -0.339 | Destabilizing | 0.863 | D | 0.227 | neutral | None | None | None | None | N |
Q/C | 0.9082 | likely_pathogenic | 0.9141 | pathogenic | 0.009 | Stabilizing | 0.999 | D | 0.385 | neutral | None | None | None | None | N |
Q/D | 0.8453 | likely_pathogenic | 0.8717 | pathogenic | 0.321 | Stabilizing | 0.759 | D | 0.249 | neutral | None | None | None | None | N |
Q/E | 0.1872 | likely_benign | 0.1957 | benign | 0.345 | Stabilizing | 0.061 | N | 0.101 | neutral | None | None | None | None | N |
Q/F | 0.8978 | likely_pathogenic | 0.8979 | pathogenic | -0.4 | Destabilizing | 0.991 | D | 0.381 | neutral | None | None | None | None | N |
Q/G | 0.7371 | likely_pathogenic | 0.7896 | pathogenic | -0.573 | Destabilizing | 0.969 | D | 0.257 | neutral | None | None | None | None | N |
Q/H | 0.4682 | ambiguous | 0.485 | ambiguous | -0.279 | Destabilizing | 0.015 | N | 0.107 | neutral | None | None | None | None | N |
Q/I | 0.6577 | likely_pathogenic | 0.6473 | pathogenic | 0.202 | Stabilizing | 0.997 | D | 0.383 | neutral | None | None | None | None | N |
Q/K | 0.2668 | likely_benign | 0.2525 | benign | 0.146 | Stabilizing | 0.826 | D | 0.268 | neutral | None | None | None | None | N |
Q/L | 0.353 | ambiguous | 0.367 | ambiguous | 0.202 | Stabilizing | 0.959 | D | 0.249 | neutral | None | None | None | None | N |
Q/M | 0.657 | likely_pathogenic | 0.6501 | pathogenic | 0.309 | Stabilizing | 0.997 | D | 0.337 | neutral | None | None | None | None | N |
Q/N | 0.6295 | likely_pathogenic | 0.6625 | pathogenic | -0.385 | Destabilizing | 0.939 | D | 0.257 | neutral | None | None | None | None | N |
Q/P | 0.9338 | likely_pathogenic | 0.9579 | pathogenic | 0.051 | Stabilizing | 0.996 | D | 0.337 | neutral | None | None | None | None | N |
Q/R | 0.2241 | likely_benign | 0.2245 | benign | 0.263 | Stabilizing | 0.92 | D | 0.293 | neutral | None | None | None | None | N |
Q/S | 0.4993 | ambiguous | 0.546 | ambiguous | -0.439 | Destabilizing | 0.863 | D | 0.256 | neutral | None | None | None | None | N |
Q/T | 0.4002 | ambiguous | 0.4052 | ambiguous | -0.231 | Destabilizing | 0.969 | D | 0.257 | neutral | None | None | None | None | N |
Q/V | 0.4927 | ambiguous | 0.4836 | ambiguous | 0.051 | Stabilizing | 0.969 | D | 0.293 | neutral | None | None | None | None | N |
Q/W | 0.8964 | likely_pathogenic | 0.9073 | pathogenic | -0.324 | Destabilizing | 0.999 | D | 0.365 | neutral | None | None | None | None | N |
Q/Y | 0.81 | likely_pathogenic | 0.8068 | pathogenic | -0.07 | Destabilizing | 0.939 | D | 0.344 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.