Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10094 | 30505;30506;30507 | chr2:178702607;178702606;178702605 | chr2:179567334;179567333;179567332 |
N2AB | 9777 | 29554;29555;29556 | chr2:178702607;178702606;178702605 | chr2:179567334;179567333;179567332 |
N2A | 8850 | 26773;26774;26775 | chr2:178702607;178702606;178702605 | chr2:179567334;179567333;179567332 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs773164933 | -0.371 | 0.999 | None | 0.721 | 0.406 | 0.42538462244 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | N | None | 0 | 8.69E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/P | rs773164933 | -0.371 | 0.999 | None | 0.721 | 0.406 | 0.42538462244 | gnomAD-4.0.0 | 6.36345E-06 | None | None | None | None | N | None | 0 | 9.14495E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.3158 | likely_benign | 0.3742 | ambiguous | -0.549 | Destabilizing | 0.973 | D | 0.339 | neutral | None | None | None | None | N |
S/C | 0.8075 | likely_pathogenic | 0.8258 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
S/D | 0.9167 | likely_pathogenic | 0.9043 | pathogenic | -0.296 | Destabilizing | 0.996 | D | 0.496 | neutral | None | None | None | None | N |
S/E | 0.9358 | likely_pathogenic | 0.9406 | pathogenic | -0.34 | Destabilizing | 0.996 | D | 0.505 | neutral | None | None | None | None | N |
S/F | 0.9464 | likely_pathogenic | 0.9513 | pathogenic | -0.853 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
S/G | 0.6692 | likely_pathogenic | 0.6429 | pathogenic | -0.757 | Destabilizing | 0.996 | D | 0.424 | neutral | None | None | None | None | N |
S/H | 0.9222 | likely_pathogenic | 0.9198 | pathogenic | -1.286 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
S/I | 0.8921 | likely_pathogenic | 0.8895 | pathogenic | -0.114 | Destabilizing | 0.998 | D | 0.754 | deleterious | None | None | None | None | N |
S/K | 0.9894 | likely_pathogenic | 0.989 | pathogenic | -0.729 | Destabilizing | 0.996 | D | 0.491 | neutral | None | None | None | None | N |
S/L | 0.7912 | likely_pathogenic | 0.7809 | pathogenic | -0.114 | Destabilizing | 0.992 | D | 0.576 | neutral | None | None | None | None | N |
S/M | 0.8206 | likely_pathogenic | 0.8126 | pathogenic | 0.25 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
S/N | 0.7535 | likely_pathogenic | 0.7038 | pathogenic | -0.554 | Destabilizing | 0.996 | D | 0.493 | neutral | None | None | None | None | N |
S/P | 0.8479 | likely_pathogenic | 0.8454 | pathogenic | -0.226 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
S/Q | 0.9412 | likely_pathogenic | 0.9452 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
S/R | 0.9851 | likely_pathogenic | 0.985 | pathogenic | -0.524 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
S/T | 0.4407 | ambiguous | 0.3744 | ambiguous | -0.589 | Destabilizing | 0.543 | D | 0.279 | neutral | None | None | None | None | N |
S/V | 0.8687 | likely_pathogenic | 0.874 | pathogenic | -0.226 | Destabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | N |
S/W | 0.9424 | likely_pathogenic | 0.9427 | pathogenic | -0.839 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
S/Y | 0.8941 | likely_pathogenic | 0.89 | pathogenic | -0.584 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.