Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10109 | 30550;30551;30552 | chr2:178702562;178702561;178702560 | chr2:179567289;179567288;179567287 |
N2AB | 9792 | 29599;29600;29601 | chr2:178702562;178702561;178702560 | chr2:179567289;179567288;179567287 |
N2A | 8865 | 26818;26819;26820 | chr2:178702562;178702561;178702560 | chr2:179567289;179567288;179567287 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2075197256 | None | 0.911 | None | 0.581 | 0.334 | 0.342631996419 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.4795 | ambiguous | 0.4797 | ambiguous | -0.675 | Destabilizing | 0.911 | D | 0.581 | neutral | None | None | None | None | N |
T/C | 0.9118 | likely_pathogenic | 0.9268 | pathogenic | -0.34 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
T/D | 0.9402 | likely_pathogenic | 0.943 | pathogenic | -1.016 | Destabilizing | 0.985 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/E | 0.8801 | likely_pathogenic | 0.8939 | pathogenic | -0.818 | Destabilizing | 0.985 | D | 0.722 | prob.delet. | None | None | None | None | N |
T/F | 0.8757 | likely_pathogenic | 0.8811 | pathogenic | -0.443 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
T/G | 0.876 | likely_pathogenic | 0.8916 | pathogenic | -1.068 | Destabilizing | 0.985 | D | 0.741 | deleterious | None | None | None | None | N |
T/H | 0.7522 | likely_pathogenic | 0.7677 | pathogenic | -1.092 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
T/I | 0.7203 | likely_pathogenic | 0.7357 | pathogenic | 0.353 | Stabilizing | 0.997 | D | 0.746 | deleterious | None | None | None | None | N |
T/K | 0.7144 | likely_pathogenic | 0.7253 | pathogenic | -0.14 | Destabilizing | 0.98 | D | 0.726 | prob.delet. | None | None | None | None | N |
T/L | 0.584 | likely_pathogenic | 0.5775 | pathogenic | 0.353 | Stabilizing | 0.993 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/M | 0.4233 | ambiguous | 0.4238 | ambiguous | 0.165 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
T/N | 0.6549 | likely_pathogenic | 0.6648 | pathogenic | -0.836 | Destabilizing | 0.985 | D | 0.687 | prob.neutral | None | None | None | None | N |
T/P | 0.9683 | likely_pathogenic | 0.9669 | pathogenic | 0.041 | Stabilizing | 0.997 | D | 0.751 | deleterious | None | None | None | None | N |
T/Q | 0.7072 | likely_pathogenic | 0.7299 | pathogenic | -0.596 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
T/R | 0.684 | likely_pathogenic | 0.6782 | pathogenic | -0.336 | Destabilizing | 0.997 | D | 0.763 | deleterious | None | None | None | None | N |
T/S | 0.4633 | ambiguous | 0.4717 | ambiguous | -1.056 | Destabilizing | 0.449 | N | 0.396 | neutral | None | None | None | None | N |
T/V | 0.5836 | likely_pathogenic | 0.6128 | pathogenic | 0.041 | Stabilizing | 0.993 | D | 0.669 | neutral | None | None | None | None | N |
T/W | 0.9636 | likely_pathogenic | 0.9698 | pathogenic | -0.688 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
T/Y | 0.8682 | likely_pathogenic | 0.8836 | pathogenic | -0.223 | Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.