Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10118 | 30577;30578;30579 | chr2:178702535;178702534;178702533 | chr2:179567262;179567261;179567260 |
N2AB | 9801 | 29626;29627;29628 | chr2:178702535;178702534;178702533 | chr2:179567262;179567261;179567260 |
N2A | 8874 | 26845;26846;26847 | chr2:178702535;178702534;178702533 | chr2:179567262;179567261;179567260 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | None | None | 0.083 | 0.144 | 0.0482279557977 | gnomAD-4.0.0 | 1.59085E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85745E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.16 | likely_benign | 0.1295 | benign | -0.456 | Destabilizing | 0.022 | N | 0.144 | neutral | None | None | None | None | N |
T/C | 0.7535 | likely_pathogenic | 0.6938 | pathogenic | -0.506 | Destabilizing | 0.781 | D | 0.319 | neutral | None | None | None | None | N |
T/D | 0.7478 | likely_pathogenic | 0.6792 | pathogenic | 0.414 | Stabilizing | 0.142 | N | 0.385 | neutral | None | None | None | None | N |
T/E | 0.4404 | ambiguous | 0.3568 | ambiguous | 0.4 | Stabilizing | 0.033 | N | 0.299 | neutral | None | None | None | None | N |
T/F | 0.4955 | ambiguous | 0.4384 | ambiguous | -0.937 | Destabilizing | 0.076 | N | 0.459 | neutral | None | None | None | None | N |
T/G | 0.5315 | ambiguous | 0.4618 | ambiguous | -0.614 | Destabilizing | 0.064 | N | 0.365 | neutral | None | None | None | None | N |
T/H | 0.4678 | ambiguous | 0.3548 | ambiguous | -0.668 | Destabilizing | 0.54 | D | 0.388 | neutral | None | None | None | None | N |
T/I | 0.1748 | likely_benign | 0.1654 | benign | -0.144 | Destabilizing | None | N | 0.085 | neutral | None | None | None | None | N |
T/K | 0.2393 | likely_benign | 0.1762 | benign | -0.175 | Destabilizing | None | N | 0.083 | neutral | None | None | None | None | N |
T/L | 0.1538 | likely_benign | 0.1312 | benign | -0.144 | Destabilizing | None | N | 0.085 | neutral | None | None | None | None | N |
T/M | 0.1239 | likely_benign | 0.1093 | benign | -0.344 | Destabilizing | 0.367 | N | 0.349 | neutral | None | None | None | None | N |
T/N | 0.3131 | likely_benign | 0.2572 | benign | -0.255 | Destabilizing | 0.142 | N | 0.213 | neutral | None | None | None | None | N |
T/P | 0.413 | ambiguous | 0.36 | ambiguous | -0.219 | Destabilizing | 0.202 | N | 0.397 | neutral | None | None | None | None | N |
T/Q | 0.2626 | likely_benign | 0.2038 | benign | -0.299 | Destabilizing | 0.001 | N | 0.097 | neutral | None | None | None | None | N |
T/R | 0.2278 | likely_benign | 0.1489 | benign | 0.027 | Stabilizing | None | N | 0.086 | neutral | None | None | None | None | N |
T/S | 0.2642 | likely_benign | 0.2139 | benign | -0.508 | Destabilizing | 0.049 | N | 0.186 | neutral | None | None | None | None | N |
T/V | 0.1678 | likely_benign | 0.1568 | benign | -0.219 | Destabilizing | 0.005 | N | 0.141 | neutral | None | None | None | None | N |
T/W | 0.8194 | likely_pathogenic | 0.751 | pathogenic | -1.001 | Destabilizing | 0.931 | D | 0.368 | neutral | None | None | None | None | N |
T/Y | 0.6195 | likely_pathogenic | 0.5436 | ambiguous | -0.661 | Destabilizing | 0.54 | D | 0.449 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.