Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10128 | 30607;30608;30609 | chr2:178702505;178702504;178702503 | chr2:179567232;179567231;179567230 |
N2AB | 9811 | 29656;29657;29658 | chr2:178702505;178702504;178702503 | chr2:179567232;179567231;179567230 |
N2A | 8884 | 26875;26876;26877 | chr2:178702505;178702504;178702503 | chr2:179567232;179567231;179567230 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 0.997 | None | 0.585 | 0.363 | 0.792777554351 | gnomAD-4.0.0 | 1.36826E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79878E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7453 | likely_pathogenic | 0.6134 | pathogenic | -0.132 | Destabilizing | 0.939 | D | 0.455 | neutral | None | None | None | None | N |
D/C | 0.9807 | likely_pathogenic | 0.9691 | pathogenic | -0.009 | Destabilizing | 0.999 | D | 0.624 | neutral | None | None | None | None | N |
D/E | 0.5729 | likely_pathogenic | 0.4151 | ambiguous | -0.244 | Destabilizing | 0.02 | N | 0.191 | neutral | None | None | None | None | N |
D/F | 0.9627 | likely_pathogenic | 0.93 | pathogenic | -0.113 | Destabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | N |
D/G | 0.8319 | likely_pathogenic | 0.7797 | pathogenic | -0.304 | Destabilizing | 0.939 | D | 0.453 | neutral | None | None | None | None | N |
D/H | 0.8554 | likely_pathogenic | 0.773 | pathogenic | 0.225 | Stabilizing | 0.998 | D | 0.464 | neutral | None | None | None | None | N |
D/I | 0.9079 | likely_pathogenic | 0.8036 | pathogenic | 0.264 | Stabilizing | 0.993 | D | 0.603 | neutral | None | None | None | None | N |
D/K | 0.8989 | likely_pathogenic | 0.8234 | pathogenic | 0.357 | Stabilizing | 0.91 | D | 0.44 | neutral | None | None | None | None | N |
D/L | 0.9093 | likely_pathogenic | 0.8441 | pathogenic | 0.264 | Stabilizing | 0.986 | D | 0.613 | neutral | None | None | None | None | N |
D/M | 0.9689 | likely_pathogenic | 0.9422 | pathogenic | 0.247 | Stabilizing | 0.999 | D | 0.592 | neutral | None | None | None | None | N |
D/N | 0.4139 | ambiguous | 0.3209 | benign | 0.107 | Stabilizing | 0.939 | D | 0.421 | neutral | None | None | None | None | N |
D/P | 0.9954 | likely_pathogenic | 0.9946 | pathogenic | 0.153 | Stabilizing | 0.993 | D | 0.471 | neutral | None | None | None | None | N |
D/Q | 0.867 | likely_pathogenic | 0.7757 | pathogenic | 0.136 | Stabilizing | 0.973 | D | 0.384 | neutral | None | None | None | None | N |
D/R | 0.8902 | likely_pathogenic | 0.817 | pathogenic | 0.571 | Stabilizing | 0.986 | D | 0.566 | neutral | None | None | None | None | N |
D/S | 0.5609 | ambiguous | 0.435 | ambiguous | -0.007 | Destabilizing | 0.953 | D | 0.39 | neutral | None | None | None | None | N |
D/T | 0.7952 | likely_pathogenic | 0.6972 | pathogenic | 0.128 | Stabilizing | 0.986 | D | 0.419 | neutral | None | None | None | None | N |
D/V | 0.7784 | likely_pathogenic | 0.6057 | pathogenic | 0.153 | Stabilizing | 0.991 | D | 0.608 | neutral | None | None | None | None | N |
D/W | 0.9898 | likely_pathogenic | 0.9869 | pathogenic | -0.018 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
D/Y | 0.7981 | likely_pathogenic | 0.6952 | pathogenic | 0.121 | Stabilizing | 0.997 | D | 0.585 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.