Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10132 | 30619;30620;30621 | chr2:178702493;178702492;178702491 | chr2:179567220;179567219;179567218 |
N2AB | 9815 | 29668;29669;29670 | chr2:178702493;178702492;178702491 | chr2:179567220;179567219;179567218 |
N2A | 8888 | 26887;26888;26889 | chr2:178702493;178702492;178702491 | chr2:179567220;179567219;179567218 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | None | None | 0.942 | None | 0.801 | 0.431 | 0.611858120693 | gnomAD-4.0.0 | 3.42068E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49694E-06 | 0 | 0 |
H/R | rs1057518758 | -1.46 | 0.97 | None | 0.741 | 0.397 | 0.331365685468 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 2.87687E-04 | 0 | 0 |
H/R | rs1057518758 | -1.46 | 0.97 | None | 0.741 | 0.397 | 0.331365685468 | gnomAD-4.0.0 | 6.84137E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87259E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.9939 | likely_pathogenic | 0.992 | pathogenic | -1.911 | Destabilizing | 0.86 | D | 0.771 | deleterious | None | None | None | None | N |
H/C | 0.873 | likely_pathogenic | 0.8611 | pathogenic | -1.153 | Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | N |
H/D | 0.9974 | likely_pathogenic | 0.9967 | pathogenic | -2.041 | Highly Destabilizing | 0.904 | D | 0.793 | deleterious | None | None | None | None | N |
H/E | 0.9978 | likely_pathogenic | 0.9973 | pathogenic | -1.831 | Destabilizing | 0.86 | D | 0.725 | prob.delet. | None | None | None | None | N |
H/F | 0.9544 | likely_pathogenic | 0.9557 | pathogenic | 0.146 | Stabilizing | 0.993 | D | 0.802 | deleterious | None | None | None | None | N |
H/G | 0.996 | likely_pathogenic | 0.9958 | pathogenic | -2.332 | Highly Destabilizing | 0.86 | D | 0.777 | deleterious | None | None | None | None | N |
H/I | 0.9928 | likely_pathogenic | 0.9922 | pathogenic | -0.645 | Destabilizing | 0.978 | D | 0.848 | deleterious | None | None | None | None | N |
H/K | 0.9882 | likely_pathogenic | 0.9855 | pathogenic | -1.122 | Destabilizing | 0.86 | D | 0.792 | deleterious | None | None | None | None | N |
H/L | 0.9464 | likely_pathogenic | 0.9357 | pathogenic | -0.645 | Destabilizing | 0.942 | D | 0.801 | deleterious | None | None | None | None | N |
H/M | 0.9935 | likely_pathogenic | 0.9925 | pathogenic | -0.878 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
H/N | 0.9533 | likely_pathogenic | 0.9515 | pathogenic | -1.945 | Destabilizing | 0.904 | D | 0.732 | prob.delet. | None | None | None | None | N |
H/P | 0.9955 | likely_pathogenic | 0.9964 | pathogenic | -1.061 | Destabilizing | 0.014 | N | 0.669 | neutral | None | None | None | None | N |
H/Q | 0.9817 | likely_pathogenic | 0.9753 | pathogenic | -1.524 | Destabilizing | 0.97 | D | 0.754 | deleterious | None | None | None | None | N |
H/R | 0.9372 | likely_pathogenic | 0.921 | pathogenic | -1.269 | Destabilizing | 0.97 | D | 0.741 | deleterious | None | None | None | None | N |
H/S | 0.9798 | likely_pathogenic | 0.9773 | pathogenic | -2.08 | Highly Destabilizing | 0.86 | D | 0.791 | deleterious | None | None | None | None | N |
H/T | 0.9932 | likely_pathogenic | 0.992 | pathogenic | -1.751 | Destabilizing | 0.956 | D | 0.774 | deleterious | None | None | None | None | N |
H/V | 0.9902 | likely_pathogenic | 0.9893 | pathogenic | -1.061 | Destabilizing | 0.978 | D | 0.809 | deleterious | None | None | None | None | N |
H/W | 0.9544 | likely_pathogenic | 0.9545 | pathogenic | 0.738 | Stabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | N |
H/Y | 0.8441 | likely_pathogenic | 0.8381 | pathogenic | 0.462 | Stabilizing | 0.99 | D | 0.736 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.