Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10141 | 30646;30647;30648 | chr2:178702466;178702465;178702464 | chr2:179567193;179567192;179567191 |
N2AB | 9824 | 29695;29696;29697 | chr2:178702466;178702465;178702464 | chr2:179567193;179567192;179567191 |
N2A | 8897 | 26914;26915;26916 | chr2:178702466;178702465;178702464 | chr2:179567193;179567192;179567191 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.001 | None | 0.123 | 0.097 | 0.0884992946249 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1433 | likely_benign | 0.1268 | benign | -0.585 | Destabilizing | 0.001 | N | 0.123 | neutral | None | None | None | None | N |
P/C | 0.9386 | likely_pathogenic | 0.9432 | pathogenic | -0.461 | Destabilizing | 0.951 | D | 0.41 | neutral | None | None | None | None | N |
P/D | 0.8914 | likely_pathogenic | 0.8815 | pathogenic | -0.64 | Destabilizing | 0.418 | N | 0.319 | neutral | None | None | None | None | N |
P/E | 0.6378 | likely_pathogenic | 0.6093 | pathogenic | -0.757 | Destabilizing | 0.418 | N | 0.347 | neutral | None | None | None | None | N |
P/F | 0.9416 | likely_pathogenic | 0.9413 | pathogenic | -0.836 | Destabilizing | 0.836 | D | 0.446 | neutral | None | None | None | None | N |
P/G | 0.7726 | likely_pathogenic | 0.7345 | pathogenic | -0.736 | Destabilizing | 0.129 | N | 0.309 | neutral | None | None | None | None | N |
P/H | 0.625 | likely_pathogenic | 0.6124 | pathogenic | -0.369 | Destabilizing | 0.836 | D | 0.383 | neutral | None | None | None | None | N |
P/I | 0.7751 | likely_pathogenic | 0.7873 | pathogenic | -0.332 | Destabilizing | 0.004 | N | 0.219 | neutral | None | None | None | None | N |
P/K | 0.646 | likely_pathogenic | 0.6052 | pathogenic | -0.558 | Destabilizing | 0.264 | N | 0.343 | neutral | None | None | None | None | N |
P/L | 0.3819 | ambiguous | 0.4041 | ambiguous | -0.332 | Destabilizing | 0.101 | N | 0.334 | neutral | None | None | None | None | N |
P/M | 0.7679 | likely_pathogenic | 0.7576 | pathogenic | -0.267 | Destabilizing | 0.836 | D | 0.401 | neutral | None | None | None | None | N |
P/N | 0.8683 | likely_pathogenic | 0.8446 | pathogenic | -0.179 | Destabilizing | 0.264 | N | 0.41 | neutral | None | None | None | None | N |
P/Q | 0.4482 | ambiguous | 0.4212 | ambiguous | -0.462 | Destabilizing | 0.655 | D | 0.364 | neutral | None | None | None | None | N |
P/R | 0.4408 | ambiguous | 0.4124 | ambiguous | 0.014 | Stabilizing | 0.655 | D | 0.452 | neutral | None | None | None | None | N |
P/S | 0.3947 | ambiguous | 0.3558 | ambiguous | -0.492 | Destabilizing | 0.003 | N | 0.127 | neutral | None | None | None | None | N |
P/T | 0.3664 | ambiguous | 0.3461 | ambiguous | -0.515 | Destabilizing | 0.007 | N | 0.17 | neutral | None | None | None | None | N |
P/V | 0.5821 | likely_pathogenic | 0.5655 | pathogenic | -0.382 | Destabilizing | 0.129 | N | 0.299 | neutral | None | None | None | None | N |
P/W | 0.9673 | likely_pathogenic | 0.9683 | pathogenic | -0.932 | Destabilizing | 0.983 | D | 0.449 | neutral | None | None | None | None | N |
P/Y | 0.9207 | likely_pathogenic | 0.9227 | pathogenic | -0.633 | Destabilizing | 0.94 | D | 0.449 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.