Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10142 | 30649;30650;30651 | chr2:178702463;178702462;178702461 | chr2:179567190;179567189;179567188 |
N2AB | 9825 | 29698;29699;29700 | chr2:178702463;178702462;178702461 | chr2:179567190;179567189;179567188 |
N2A | 8898 | 26917;26918;26919 | chr2:178702463;178702462;178702461 | chr2:179567190;179567189;179567188 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1577675584 | None | 0.896 | None | 0.439 | 0.24 | 0.201204373187 | gnomAD-4.0.0 | 2.73666E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99395E-07 | 0 | 4.96919E-05 |
D/Y | None | None | 0.995 | None | 0.481 | 0.275 | 0.332133492242 | gnomAD-4.0.0 | 2.05249E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69819E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3817 | ambiguous | 0.3327 | benign | -0.003 | Destabilizing | 0.103 | N | 0.251 | neutral | None | None | None | None | N |
D/C | 0.963 | likely_pathogenic | 0.9618 | pathogenic | 0.163 | Stabilizing | 0.999 | D | 0.498 | neutral | None | None | None | None | N |
D/E | 0.2801 | likely_benign | 0.2299 | benign | -0.198 | Destabilizing | 0.028 | N | 0.166 | neutral | None | None | None | None | N |
D/F | 0.9359 | likely_pathogenic | 0.923 | pathogenic | -0.193 | Destabilizing | 0.996 | D | 0.481 | neutral | None | None | None | None | N |
D/G | 0.5059 | ambiguous | 0.4612 | ambiguous | -0.122 | Destabilizing | 0.811 | D | 0.419 | neutral | None | None | None | None | N |
D/H | 0.793 | likely_pathogenic | 0.717 | pathogenic | 0.215 | Stabilizing | 0.984 | D | 0.392 | neutral | None | None | None | None | N |
D/I | 0.861 | likely_pathogenic | 0.8396 | pathogenic | 0.241 | Stabilizing | 0.988 | D | 0.488 | neutral | None | None | None | None | N |
D/K | 0.7894 | likely_pathogenic | 0.6913 | pathogenic | 0.514 | Stabilizing | 0.851 | D | 0.425 | neutral | None | None | None | None | N |
D/L | 0.8049 | likely_pathogenic | 0.7706 | pathogenic | 0.241 | Stabilizing | 0.976 | D | 0.431 | neutral | None | None | None | None | N |
D/M | 0.9225 | likely_pathogenic | 0.8968 | pathogenic | 0.238 | Stabilizing | 0.999 | D | 0.47 | neutral | None | None | None | None | N |
D/N | 0.2937 | likely_benign | 0.2445 | benign | 0.409 | Stabilizing | 0.896 | D | 0.439 | neutral | None | None | None | None | N |
D/P | 0.9821 | likely_pathogenic | 0.9811 | pathogenic | 0.18 | Stabilizing | 0.988 | D | 0.385 | neutral | None | None | None | None | N |
D/Q | 0.7132 | likely_pathogenic | 0.5627 | ambiguous | 0.396 | Stabilizing | 0.851 | D | 0.389 | neutral | None | None | None | None | N |
D/R | 0.834 | likely_pathogenic | 0.7517 | pathogenic | 0.64 | Stabilizing | 0.976 | D | 0.429 | neutral | None | None | None | None | N |
D/S | 0.3181 | likely_benign | 0.2628 | benign | 0.288 | Stabilizing | 0.851 | D | 0.398 | neutral | None | None | None | None | N |
D/T | 0.6437 | likely_pathogenic | 0.598 | pathogenic | 0.377 | Stabilizing | 0.919 | D | 0.442 | neutral | None | None | None | None | N |
D/V | 0.6805 | likely_pathogenic | 0.6425 | pathogenic | 0.18 | Stabilizing | 0.896 | D | 0.449 | neutral | None | None | None | None | N |
D/W | 0.988 | likely_pathogenic | 0.986 | pathogenic | -0.175 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
D/Y | 0.7136 | likely_pathogenic | 0.6742 | pathogenic | 0.027 | Stabilizing | 0.995 | D | 0.481 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.