Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10154 | 30685;30686;30687 | chr2:178702219;178702218;178702217 | chr2:179566946;179566945;179566944 |
N2AB | 9837 | 29734;29735;29736 | chr2:178702219;178702218;178702217 | chr2:179566946;179566945;179566944 |
N2A | 8910 | 26953;26954;26955 | chr2:178702219;178702218;178702217 | chr2:179566946;179566945;179566944 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs761055099 | -0.628 | 1.0 | None | 0.641 | 0.4 | 0.260249123532 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.85E-06 | 0 |
E/G | rs761055099 | -0.628 | 1.0 | None | 0.641 | 0.4 | 0.260249123532 | gnomAD-4.0.0 | 1.59085E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85745E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5012 | ambiguous | 0.5155 | ambiguous | -0.165 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | I |
E/C | 0.9868 | likely_pathogenic | 0.9877 | pathogenic | -0.242 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
E/D | 0.6107 | likely_pathogenic | 0.6257 | pathogenic | -0.334 | Destabilizing | 0.999 | D | 0.515 | neutral | None | None | None | None | I |
E/F | 0.9489 | likely_pathogenic | 0.9473 | pathogenic | -0.007 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/G | 0.643 | likely_pathogenic | 0.6475 | pathogenic | -0.334 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
E/H | 0.8908 | likely_pathogenic | 0.8921 | pathogenic | 0.521 | Stabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | I |
E/I | 0.8738 | likely_pathogenic | 0.8882 | pathogenic | 0.238 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
E/K | 0.7423 | likely_pathogenic | 0.7362 | pathogenic | 0.4 | Stabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | I |
E/L | 0.8226 | likely_pathogenic | 0.8272 | pathogenic | 0.238 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
E/M | 0.8867 | likely_pathogenic | 0.8942 | pathogenic | 0.049 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
E/N | 0.8381 | likely_pathogenic | 0.8489 | pathogenic | -0.041 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
E/P | 0.7178 | likely_pathogenic | 0.709 | pathogenic | 0.123 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
E/Q | 0.476 | ambiguous | 0.4849 | ambiguous | 0.012 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | I |
E/R | 0.8102 | likely_pathogenic | 0.8027 | pathogenic | 0.698 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
E/S | 0.6213 | likely_pathogenic | 0.6377 | pathogenic | -0.158 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/T | 0.7828 | likely_pathogenic | 0.7971 | pathogenic | -0.007 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
E/V | 0.7504 | likely_pathogenic | 0.767 | pathogenic | 0.123 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
E/W | 0.984 | likely_pathogenic | 0.9821 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
E/Y | 0.9109 | likely_pathogenic | 0.9078 | pathogenic | 0.233 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.