Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 10155 | 30688;30689;30690 | chr2:178702216;178702215;178702214 | chr2:179566943;179566942;179566941 |
N2AB | 9838 | 29737;29738;29739 | chr2:178702216;178702215;178702214 | chr2:179566943;179566942;179566941 |
N2A | 8911 | 26956;26957;26958 | chr2:178702216;178702215;178702214 | chr2:179566943;179566942;179566941 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | None | 0.797 | 0.522 | 0.801471871174 | gnomAD-4.0.0 | 1.59085E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85745E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.858 | likely_pathogenic | 0.8419 | pathogenic | -0.381 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
P/C | 0.994 | likely_pathogenic | 0.9939 | pathogenic | -0.816 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
P/D | 0.9303 | likely_pathogenic | 0.9253 | pathogenic | -0.415 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
P/E | 0.9322 | likely_pathogenic | 0.9308 | pathogenic | -0.525 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
P/F | 0.9924 | likely_pathogenic | 0.9924 | pathogenic | -0.689 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
P/G | 0.9022 | likely_pathogenic | 0.8991 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
P/H | 0.9429 | likely_pathogenic | 0.9407 | pathogenic | 0.01 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
P/I | 0.9768 | likely_pathogenic | 0.9763 | pathogenic | -0.315 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
P/K | 0.9606 | likely_pathogenic | 0.9572 | pathogenic | -0.458 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
P/L | 0.929 | likely_pathogenic | 0.9199 | pathogenic | -0.315 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
P/M | 0.9806 | likely_pathogenic | 0.9794 | pathogenic | -0.595 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
P/N | 0.9355 | likely_pathogenic | 0.9321 | pathogenic | -0.283 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
P/Q | 0.9421 | likely_pathogenic | 0.9377 | pathogenic | -0.494 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
P/R | 0.9296 | likely_pathogenic | 0.923 | pathogenic | 0.025 | Stabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
P/S | 0.9056 | likely_pathogenic | 0.8971 | pathogenic | -0.588 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
P/T | 0.8792 | likely_pathogenic | 0.8702 | pathogenic | -0.605 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
P/V | 0.9477 | likely_pathogenic | 0.9456 | pathogenic | -0.308 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
P/W | 0.9943 | likely_pathogenic | 0.9938 | pathogenic | -0.751 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
P/Y | 0.9807 | likely_pathogenic | 0.9801 | pathogenic | -0.478 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.