Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1018 | 3277;3278;3279 | chr2:178782854;178782853;178782852 | chr2:179647581;179647580;179647579 |
N2AB | 1018 | 3277;3278;3279 | chr2:178782854;178782853;178782852 | chr2:179647581;179647580;179647579 |
N2A | 1018 | 3277;3278;3279 | chr2:178782854;178782853;178782852 | chr2:179647581;179647580;179647579 |
N2B | 972 | 3139;3140;3141 | chr2:178782854;178782853;178782852 | chr2:179647581;179647580;179647579 |
Novex-1 | 972 | 3139;3140;3141 | chr2:178782854;178782853;178782852 | chr2:179647581;179647580;179647579 |
Novex-2 | 972 | 3139;3140;3141 | chr2:178782854;178782853;178782852 | chr2:179647581;179647580;179647579 |
Novex-3 | 1018 | 3277;3278;3279 | chr2:178782854;178782853;178782852 | chr2:179647581;179647580;179647579 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs878967057 | None | 0.001 | N | 0.089 | 0.149 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/A | rs878967057 | None | 0.001 | N | 0.089 | 0.149 | None | gnomAD-4.0.0 | 6.56927E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46977E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1937 | likely_benign | 0.2179 | benign | -1.204 | Destabilizing | 0.001 | N | 0.089 | neutral | N | 0.497897518 | None | None | I |
V/C | 0.8244 | likely_pathogenic | 0.8491 | pathogenic | -0.927 | Destabilizing | 0.836 | D | 0.481 | neutral | None | None | None | None | I |
V/D | 0.4689 | ambiguous | 0.5378 | ambiguous | -1.284 | Destabilizing | 0.418 | N | 0.546 | neutral | None | None | None | None | I |
V/E | 0.2267 | likely_benign | 0.2496 | benign | -1.364 | Destabilizing | 0.183 | N | 0.465 | neutral | N | 0.449857546 | None | None | I |
V/F | 0.2088 | likely_benign | 0.2297 | benign | -1.32 | Destabilizing | 0.716 | D | 0.483 | neutral | None | None | None | None | I |
V/G | 0.2892 | likely_benign | 0.3371 | benign | -1.414 | Destabilizing | 0.101 | N | 0.5 | neutral | N | 0.510966168 | None | None | I |
V/H | 0.5371 | ambiguous | 0.5786 | pathogenic | -0.928 | Destabilizing | 0.94 | D | 0.543 | neutral | None | None | None | None | I |
V/I | 0.0822 | likely_benign | 0.0812 | benign | -0.763 | Destabilizing | 0.101 | N | 0.326 | neutral | N | 0.495240634 | None | None | I |
V/K | 0.2143 | likely_benign | 0.2171 | benign | -0.89 | Destabilizing | 0.228 | N | 0.463 | neutral | None | None | None | None | I |
V/L | 0.2016 | likely_benign | 0.2278 | benign | -0.763 | Destabilizing | 0.017 | N | 0.208 | neutral | N | 0.50557758 | None | None | I |
V/M | 0.1054 | likely_benign | 0.1089 | benign | -0.495 | Destabilizing | 0.01 | N | 0.215 | neutral | None | None | None | None | I |
V/N | 0.3098 | likely_benign | 0.3399 | benign | -0.662 | Destabilizing | 0.418 | N | 0.553 | neutral | None | None | None | None | I |
V/P | 0.972 | likely_pathogenic | 0.9828 | pathogenic | -0.876 | Destabilizing | 0.593 | D | 0.536 | neutral | None | None | None | None | I |
V/Q | 0.228 | likely_benign | 0.2446 | benign | -0.987 | Destabilizing | 0.593 | D | 0.535 | neutral | None | None | None | None | I |
V/R | 0.2172 | likely_benign | 0.2368 | benign | -0.283 | Destabilizing | 0.418 | N | 0.578 | neutral | None | None | None | None | I |
V/S | 0.2083 | likely_benign | 0.23 | benign | -1.082 | Destabilizing | 0.004 | N | 0.213 | neutral | None | None | None | None | I |
V/T | 0.1432 | likely_benign | 0.1479 | benign | -1.068 | Destabilizing | 0.001 | N | 0.112 | neutral | None | None | None | None | I |
V/W | 0.8426 | likely_pathogenic | 0.88 | pathogenic | -1.393 | Destabilizing | 0.983 | D | 0.533 | neutral | None | None | None | None | I |
V/Y | 0.6377 | likely_pathogenic | 0.6668 | pathogenic | -1.091 | Destabilizing | 0.836 | D | 0.479 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.