Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1023 | 3292;3293;3294 | chr2:178782839;178782838;178782837 | chr2:179647566;179647565;179647564 |
N2AB | 1023 | 3292;3293;3294 | chr2:178782839;178782838;178782837 | chr2:179647566;179647565;179647564 |
N2A | 1023 | 3292;3293;3294 | chr2:178782839;178782838;178782837 | chr2:179647566;179647565;179647564 |
N2B | 977 | 3154;3155;3156 | chr2:178782839;178782838;178782837 | chr2:179647566;179647565;179647564 |
Novex-1 | 977 | 3154;3155;3156 | chr2:178782839;178782838;178782837 | chr2:179647566;179647565;179647564 |
Novex-2 | 977 | 3154;3155;3156 | chr2:178782839;178782838;178782837 | chr2:179647566;179647565;179647564 |
Novex-3 | 1023 | 3292;3293;3294 | chr2:178782839;178782838;178782837 | chr2:179647566;179647565;179647564 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.997 | N | 0.669 | 0.389 | 0.536100336011 | gnomAD-4.0.0 | 1.36872E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79879E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1239 | likely_benign | 0.1552 | benign | -0.463 | Destabilizing | 0.898 | D | 0.485 | neutral | N | 0.482348844 | None | None | I |
T/C | 0.6953 | likely_pathogenic | 0.7552 | pathogenic | -0.392 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | I |
T/D | 0.6204 | likely_pathogenic | 0.7314 | pathogenic | 0.137 | Stabilizing | 0.995 | D | 0.602 | neutral | None | None | None | None | I |
T/E | 0.3998 | ambiguous | 0.5211 | ambiguous | 0.066 | Stabilizing | 0.995 | D | 0.604 | neutral | None | None | None | None | I |
T/F | 0.4203 | ambiguous | 0.5267 | ambiguous | -0.882 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | I |
T/G | 0.5018 | ambiguous | 0.5992 | pathogenic | -0.605 | Destabilizing | 0.966 | D | 0.609 | neutral | None | None | None | None | I |
T/H | 0.3687 | ambiguous | 0.4407 | ambiguous | -0.889 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
T/I | 0.3035 | likely_benign | 0.3915 | ambiguous | -0.206 | Destabilizing | 0.997 | D | 0.669 | neutral | N | 0.457785789 | None | None | I |
T/K | 0.2582 | likely_benign | 0.3375 | benign | -0.456 | Destabilizing | 0.995 | D | 0.608 | neutral | None | None | None | None | I |
T/L | 0.2096 | likely_benign | 0.2616 | benign | -0.206 | Destabilizing | 0.983 | D | 0.601 | neutral | None | None | None | None | I |
T/M | 0.109 | likely_benign | 0.1329 | benign | -0.033 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
T/N | 0.2012 | likely_benign | 0.2406 | benign | -0.266 | Destabilizing | 0.993 | D | 0.64 | neutral | N | 0.47921575 | None | None | I |
T/P | 0.5757 | likely_pathogenic | 0.7387 | pathogenic | -0.263 | Destabilizing | 0.997 | D | 0.656 | neutral | N | 0.512815201 | None | None | I |
T/Q | 0.2937 | likely_benign | 0.3606 | ambiguous | -0.512 | Destabilizing | 0.998 | D | 0.663 | neutral | None | None | None | None | I |
T/R | 0.2141 | likely_benign | 0.2996 | benign | -0.164 | Destabilizing | 0.995 | D | 0.651 | neutral | None | None | None | None | I |
T/S | 0.1408 | likely_benign | 0.1554 | benign | -0.501 | Destabilizing | 0.362 | N | 0.333 | neutral | N | 0.406877454 | None | None | I |
T/V | 0.2206 | likely_benign | 0.2652 | benign | -0.263 | Destabilizing | 0.983 | D | 0.587 | neutral | None | None | None | None | I |
T/W | 0.7894 | likely_pathogenic | 0.8588 | pathogenic | -0.846 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
T/Y | 0.5074 | ambiguous | 0.5993 | pathogenic | -0.584 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.