Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1088 | 3487;3488;3489 | chr2:178782330;178782329;178782328 | chr2:179647057;179647056;179647055 |
N2AB | 1088 | 3487;3488;3489 | chr2:178782330;178782329;178782328 | chr2:179647057;179647056;179647055 |
N2A | 1088 | 3487;3488;3489 | chr2:178782330;178782329;178782328 | chr2:179647057;179647056;179647055 |
N2B | 1042 | 3349;3350;3351 | chr2:178782330;178782329;178782328 | chr2:179647057;179647056;179647055 |
Novex-1 | 1042 | 3349;3350;3351 | chr2:178782330;178782329;178782328 | chr2:179647057;179647056;179647055 |
Novex-2 | 1042 | 3349;3350;3351 | chr2:178782330;178782329;178782328 | chr2:179647057;179647056;179647055 |
Novex-3 | 1088 | 3487;3488;3489 | chr2:178782330;178782329;178782328 | chr2:179647057;179647056;179647055 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | D | 0.851 | 0.523 | 0.293147016451 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.6204 | likely_pathogenic | 0.5655 | pathogenic | -1.411 | Destabilizing | 1.0 | D | 0.785 | deleterious | D | 0.560124779 | None | None | I |
P/C | 0.9887 | likely_pathogenic | 0.9827 | pathogenic | -0.989 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
P/D | 0.9931 | likely_pathogenic | 0.9896 | pathogenic | -0.845 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
P/E | 0.9824 | likely_pathogenic | 0.9758 | pathogenic | -0.705 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
P/F | 0.9943 | likely_pathogenic | 0.9915 | pathogenic | -0.772 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | I |
P/G | 0.9644 | likely_pathogenic | 0.9514 | pathogenic | -1.869 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
P/H | 0.9863 | likely_pathogenic | 0.9792 | pathogenic | -1.406 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
P/I | 0.9309 | likely_pathogenic | 0.9057 | pathogenic | -0.196 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | I |
P/K | 0.9933 | likely_pathogenic | 0.9899 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
P/L | 0.6585 | likely_pathogenic | 0.6043 | pathogenic | -0.196 | Destabilizing | 1.0 | D | 0.901 | deleterious | N | 0.447263924 | None | None | I |
P/M | 0.9396 | likely_pathogenic | 0.9189 | pathogenic | -0.289 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
P/N | 0.988 | likely_pathogenic | 0.9812 | pathogenic | -0.999 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | I |
P/Q | 0.976 | likely_pathogenic | 0.9668 | pathogenic | -0.907 | Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.625754834 | None | None | I |
P/R | 0.9841 | likely_pathogenic | 0.9769 | pathogenic | -0.805 | Destabilizing | 1.0 | D | 0.901 | deleterious | D | 0.602611244 | None | None | I |
P/S | 0.9445 | likely_pathogenic | 0.9198 | pathogenic | -1.716 | Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.544237245 | None | None | I |
P/T | 0.8612 | likely_pathogenic | 0.8185 | pathogenic | -1.422 | Destabilizing | 1.0 | D | 0.861 | deleterious | N | 0.494974506 | None | None | I |
P/V | 0.8504 | likely_pathogenic | 0.7937 | pathogenic | -0.567 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
P/W | 0.9986 | likely_pathogenic | 0.9978 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
P/Y | 0.996 | likely_pathogenic | 0.9934 | pathogenic | -0.685 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.