Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1090 | 3493;3494;3495 | chr2:178782324;178782323;178782322 | chr2:179647051;179647050;179647049 |
N2AB | 1090 | 3493;3494;3495 | chr2:178782324;178782323;178782322 | chr2:179647051;179647050;179647049 |
N2A | 1090 | 3493;3494;3495 | chr2:178782324;178782323;178782322 | chr2:179647051;179647050;179647049 |
N2B | 1044 | 3355;3356;3357 | chr2:178782324;178782323;178782322 | chr2:179647051;179647050;179647049 |
Novex-1 | 1044 | 3355;3356;3357 | chr2:178782324;178782323;178782322 | chr2:179647051;179647050;179647049 |
Novex-2 | 1044 | 3355;3356;3357 | chr2:178782324;178782323;178782322 | chr2:179647051;179647050;179647049 |
Novex-3 | 1090 | 3493;3494;3495 | chr2:178782324;178782323;178782322 | chr2:179647051;179647050;179647049 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1419239601 | None | None | N | 0.127 | 0.104 | 0.259761712551 | gnomAD-4.0.0 | 1.36815E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99298E-07 | 0 | 1.6559E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.219 | likely_benign | 0.2138 | benign | -0.692 | Destabilizing | None | N | 0.063 | neutral | N | 0.426370641 | None | None | I |
V/C | 0.8916 | likely_pathogenic | 0.8715 | pathogenic | -0.683 | Destabilizing | 0.824 | D | 0.364 | neutral | None | None | None | None | I |
V/D | 0.6553 | likely_pathogenic | 0.624 | pathogenic | -0.272 | Destabilizing | 0.317 | N | 0.387 | neutral | N | 0.36842078 | None | None | I |
V/E | 0.4884 | ambiguous | 0.4673 | ambiguous | -0.334 | Destabilizing | 0.149 | N | 0.331 | neutral | None | None | None | None | I |
V/F | 0.3069 | likely_benign | 0.2752 | benign | -0.624 | Destabilizing | 0.317 | N | 0.381 | neutral | N | 0.448477429 | None | None | I |
V/G | 0.392 | ambiguous | 0.3704 | ambiguous | -0.899 | Destabilizing | 0.062 | N | 0.332 | neutral | N | 0.432824249 | None | None | I |
V/H | 0.8202 | likely_pathogenic | 0.7905 | pathogenic | -0.336 | Destabilizing | 0.935 | D | 0.373 | neutral | None | None | None | None | I |
V/I | 0.1005 | likely_benign | 0.0929 | benign | -0.273 | Destabilizing | None | N | 0.127 | neutral | N | 0.440976982 | None | None | I |
V/K | 0.6418 | likely_pathogenic | 0.6115 | pathogenic | -0.586 | Destabilizing | 0.149 | N | 0.327 | neutral | None | None | None | None | I |
V/L | 0.33 | likely_benign | 0.2902 | benign | -0.273 | Destabilizing | 0.004 | N | 0.252 | neutral | N | 0.437487752 | None | None | I |
V/M | 0.2378 | likely_benign | 0.2133 | benign | -0.394 | Destabilizing | 0.016 | N | 0.227 | neutral | None | None | None | None | I |
V/N | 0.5134 | ambiguous | 0.4949 | ambiguous | -0.395 | Destabilizing | 0.555 | D | 0.39 | neutral | None | None | None | None | I |
V/P | 0.387 | ambiguous | 0.3858 | ambiguous | -0.376 | Destabilizing | 0.001 | N | 0.262 | neutral | None | None | None | None | I |
V/Q | 0.5186 | ambiguous | 0.5023 | ambiguous | -0.573 | Destabilizing | 0.555 | D | 0.367 | neutral | None | None | None | None | I |
V/R | 0.5672 | likely_pathogenic | 0.541 | ambiguous | -0.092 | Destabilizing | 0.38 | N | 0.389 | neutral | None | None | None | None | I |
V/S | 0.3002 | likely_benign | 0.2909 | benign | -0.839 | Destabilizing | 0.081 | N | 0.285 | neutral | None | None | None | None | I |
V/T | 0.2834 | likely_benign | 0.273 | benign | -0.79 | Destabilizing | 0.081 | N | 0.161 | neutral | None | None | None | None | I |
V/W | 0.9247 | likely_pathogenic | 0.9068 | pathogenic | -0.736 | Destabilizing | 0.935 | D | 0.447 | neutral | None | None | None | None | I |
V/Y | 0.778 | likely_pathogenic | 0.7556 | pathogenic | -0.435 | Destabilizing | 0.555 | D | 0.377 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.