Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1095 | 3508;3509;3510 | chr2:178782309;178782308;178782307 | chr2:179647036;179647035;179647034 |
N2AB | 1095 | 3508;3509;3510 | chr2:178782309;178782308;178782307 | chr2:179647036;179647035;179647034 |
N2A | 1095 | 3508;3509;3510 | chr2:178782309;178782308;178782307 | chr2:179647036;179647035;179647034 |
N2B | 1049 | 3370;3371;3372 | chr2:178782309;178782308;178782307 | chr2:179647036;179647035;179647034 |
Novex-1 | 1049 | 3370;3371;3372 | chr2:178782309;178782308;178782307 | chr2:179647036;179647035;179647034 |
Novex-2 | 1049 | 3370;3371;3372 | chr2:178782309;178782308;178782307 | chr2:179647036;179647035;179647034 |
Novex-3 | 1095 | 3508;3509;3510 | chr2:178782309;178782308;178782307 | chr2:179647036;179647035;179647034 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs372103803 | None | 0.999 | N | 0.444 | 0.221 | 0.266843984389 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs372103803 | None | 0.999 | N | 0.444 | 0.221 | 0.266843984389 | gnomAD-4.0.0 | 7.43491E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47456E-06 | 0 | 3.20082E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3627 | ambiguous | 0.4059 | ambiguous | -0.588 | Destabilizing | 0.999 | D | 0.632 | neutral | N | 0.452808236 | None | None | I |
E/C | 0.9808 | likely_pathogenic | 0.983 | pathogenic | -0.312 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
E/D | 0.4892 | ambiguous | 0.4935 | ambiguous | -0.373 | Destabilizing | 0.999 | D | 0.444 | neutral | N | 0.453320328 | None | None | I |
E/F | 0.974 | likely_pathogenic | 0.9767 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
E/G | 0.5512 | ambiguous | 0.5865 | pathogenic | -0.824 | Destabilizing | 1.0 | D | 0.659 | neutral | D | 0.620874159 | None | None | I |
E/H | 0.89 | likely_pathogenic | 0.9006 | pathogenic | 0.156 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
E/I | 0.8193 | likely_pathogenic | 0.8367 | pathogenic | 0.021 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
E/K | 0.436 | ambiguous | 0.4775 | ambiguous | 0.216 | Stabilizing | 0.999 | D | 0.607 | neutral | N | 0.482996606 | None | None | I |
E/L | 0.8221 | likely_pathogenic | 0.8304 | pathogenic | 0.021 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
E/M | 0.8628 | likely_pathogenic | 0.8806 | pathogenic | 0.079 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
E/N | 0.7343 | likely_pathogenic | 0.7626 | pathogenic | -0.381 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
E/P | 0.7016 | likely_pathogenic | 0.7248 | pathogenic | -0.163 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | I |
E/Q | 0.3969 | ambiguous | 0.4284 | ambiguous | -0.285 | Destabilizing | 1.0 | D | 0.627 | neutral | N | 0.462146957 | None | None | I |
E/R | 0.6161 | likely_pathogenic | 0.649 | pathogenic | 0.529 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
E/S | 0.5146 | ambiguous | 0.5522 | ambiguous | -0.524 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | I |
E/T | 0.6239 | likely_pathogenic | 0.663 | pathogenic | -0.311 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
E/V | 0.6097 | likely_pathogenic | 0.6437 | pathogenic | -0.163 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | N | 0.455045563 | None | None | I |
E/W | 0.9918 | likely_pathogenic | 0.9925 | pathogenic | 0.143 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
E/Y | 0.9513 | likely_pathogenic | 0.956 | pathogenic | 0.133 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.