Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1105 | 3538;3539;3540 | chr2:178782279;178782278;178782277 | chr2:179647006;179647005;179647004 |
N2AB | 1105 | 3538;3539;3540 | chr2:178782279;178782278;178782277 | chr2:179647006;179647005;179647004 |
N2A | 1105 | 3538;3539;3540 | chr2:178782279;178782278;178782277 | chr2:179647006;179647005;179647004 |
N2B | 1059 | 3400;3401;3402 | chr2:178782279;178782278;178782277 | chr2:179647006;179647005;179647004 |
Novex-1 | 1059 | 3400;3401;3402 | chr2:178782279;178782278;178782277 | chr2:179647006;179647005;179647004 |
Novex-2 | 1059 | 3400;3401;3402 | chr2:178782279;178782278;178782277 | chr2:179647006;179647005;179647004 |
Novex-3 | 1105 | 3538;3539;3540 | chr2:178782279;178782278;178782277 | chr2:179647006;179647005;179647004 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1263142800 | -2.14 | 0.104 | N | 0.665 | 0.364 | 0.514240282655 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/A | rs1263142800 | -2.14 | 0.104 | N | 0.665 | 0.364 | 0.514240282655 | gnomAD-4.0.0 | 5.47256E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39577E-06 | 1.15931E-05 | 1.65585E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5925 | likely_pathogenic | 0.5817 | pathogenic | -1.99 | Destabilizing | 0.104 | N | 0.665 | neutral | N | 0.514819133 | None | None | N |
V/C | 0.9626 | likely_pathogenic | 0.9603 | pathogenic | -1.26 | Destabilizing | 0.968 | D | 0.766 | deleterious | None | None | None | None | N |
V/D | 0.9948 | likely_pathogenic | 0.9941 | pathogenic | -2.809 | Highly Destabilizing | 0.667 | D | 0.858 | deleterious | D | 0.728906948 | None | None | N |
V/E | 0.9835 | likely_pathogenic | 0.9811 | pathogenic | -2.505 | Highly Destabilizing | 0.726 | D | 0.837 | deleterious | None | None | None | None | N |
V/F | 0.6696 | likely_pathogenic | 0.6797 | pathogenic | -1.134 | Destabilizing | 0.497 | N | 0.813 | deleterious | D | 0.641097719 | None | None | N |
V/G | 0.8885 | likely_pathogenic | 0.8812 | pathogenic | -2.59 | Highly Destabilizing | 0.667 | D | 0.852 | deleterious | D | 0.660213227 | None | None | N |
V/H | 0.9952 | likely_pathogenic | 0.9946 | pathogenic | -2.577 | Highly Destabilizing | 0.968 | D | 0.843 | deleterious | None | None | None | None | N |
V/I | 0.0796 | likely_benign | 0.0842 | benign | -0.263 | Destabilizing | None | N | 0.21 | neutral | D | 0.52739673 | None | None | N |
V/K | 0.9913 | likely_pathogenic | 0.9895 | pathogenic | -1.437 | Destabilizing | 0.726 | D | 0.839 | deleterious | None | None | None | None | N |
V/L | 0.4807 | ambiguous | 0.4877 | ambiguous | -0.263 | Destabilizing | 0.009 | N | 0.456 | neutral | D | 0.533985411 | None | None | N |
V/M | 0.5345 | ambiguous | 0.5445 | ambiguous | -0.402 | Destabilizing | 0.567 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/N | 0.9846 | likely_pathogenic | 0.9842 | pathogenic | -2.03 | Highly Destabilizing | 0.89 | D | 0.857 | deleterious | None | None | None | None | N |
V/P | 0.9857 | likely_pathogenic | 0.9851 | pathogenic | -0.817 | Destabilizing | 0.89 | D | 0.827 | deleterious | None | None | None | None | N |
V/Q | 0.9866 | likely_pathogenic | 0.9846 | pathogenic | -1.696 | Destabilizing | 0.89 | D | 0.833 | deleterious | None | None | None | None | N |
V/R | 0.9826 | likely_pathogenic | 0.9793 | pathogenic | -1.594 | Destabilizing | 0.726 | D | 0.859 | deleterious | None | None | None | None | N |
V/S | 0.9033 | likely_pathogenic | 0.8998 | pathogenic | -2.568 | Highly Destabilizing | 0.726 | D | 0.818 | deleterious | None | None | None | None | N |
V/T | 0.6677 | likely_pathogenic | 0.6449 | pathogenic | -2.107 | Highly Destabilizing | 0.272 | N | 0.683 | prob.neutral | None | None | None | None | N |
V/W | 0.9918 | likely_pathogenic | 0.9917 | pathogenic | -1.754 | Destabilizing | 0.968 | D | 0.818 | deleterious | None | None | None | None | N |
V/Y | 0.9753 | likely_pathogenic | 0.9743 | pathogenic | -1.342 | Destabilizing | 0.726 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.