Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1110 | 3553;3554;3555 | chr2:178782264;178782263;178782262 | chr2:179646991;179646990;179646989 |
N2AB | 1110 | 3553;3554;3555 | chr2:178782264;178782263;178782262 | chr2:179646991;179646990;179646989 |
N2A | 1110 | 3553;3554;3555 | chr2:178782264;178782263;178782262 | chr2:179646991;179646990;179646989 |
N2B | 1064 | 3415;3416;3417 | chr2:178782264;178782263;178782262 | chr2:179646991;179646990;179646989 |
Novex-1 | 1064 | 3415;3416;3417 | chr2:178782264;178782263;178782262 | chr2:179646991;179646990;179646989 |
Novex-2 | 1064 | 3415;3416;3417 | chr2:178782264;178782263;178782262 | chr2:179646991;179646990;179646989 |
Novex-3 | 1110 | 3553;3554;3555 | chr2:178782264;178782263;178782262 | chr2:179646991;179646990;179646989 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.125 | N | 0.264 | 0.17 | 0.190952846119 | gnomAD-4.0.0 | 1.5905E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85654E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5393 | ambiguous | 0.491 | ambiguous | -0.311 | Destabilizing | 0.754 | D | 0.663 | neutral | None | None | None | None | N |
K/C | 0.9047 | likely_pathogenic | 0.8956 | pathogenic | -0.248 | Destabilizing | 0.998 | D | 0.76 | deleterious | None | None | None | None | N |
K/D | 0.9215 | likely_pathogenic | 0.8976 | pathogenic | 0.193 | Stabilizing | 0.956 | D | 0.643 | neutral | None | None | None | None | N |
K/E | 0.5247 | ambiguous | 0.4534 | ambiguous | 0.269 | Stabilizing | 0.698 | D | 0.629 | neutral | N | 0.499866909 | None | None | N |
K/F | 0.9211 | likely_pathogenic | 0.9005 | pathogenic | -0.158 | Destabilizing | 0.993 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/G | 0.8253 | likely_pathogenic | 0.798 | pathogenic | -0.625 | Destabilizing | 0.86 | D | 0.648 | neutral | None | None | None | None | N |
K/H | 0.647 | likely_pathogenic | 0.6117 | pathogenic | -0.984 | Destabilizing | 0.994 | D | 0.657 | neutral | None | None | None | None | N |
K/I | 0.5134 | ambiguous | 0.4668 | ambiguous | 0.476 | Stabilizing | 0.978 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/L | 0.5126 | ambiguous | 0.4817 | ambiguous | 0.476 | Stabilizing | 0.86 | D | 0.648 | neutral | None | None | None | None | N |
K/M | 0.4287 | ambiguous | 0.4058 | ambiguous | 0.264 | Stabilizing | 0.992 | D | 0.656 | neutral | N | 0.514204684 | None | None | N |
K/N | 0.8208 | likely_pathogenic | 0.7821 | pathogenic | -0.017 | Destabilizing | 0.942 | D | 0.602 | neutral | D | 0.530337194 | None | None | N |
K/P | 0.6831 | likely_pathogenic | 0.6801 | pathogenic | 0.244 | Stabilizing | 0.978 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/Q | 0.2713 | likely_benign | 0.2422 | benign | -0.085 | Destabilizing | 0.125 | N | 0.264 | neutral | N | 0.505132299 | None | None | N |
K/R | 0.1079 | likely_benign | 0.1062 | benign | -0.378 | Destabilizing | 0.014 | N | 0.189 | neutral | N | 0.489949363 | None | None | N |
K/S | 0.7289 | likely_pathogenic | 0.6806 | pathogenic | -0.61 | Destabilizing | 0.754 | D | 0.636 | neutral | None | None | None | None | N |
K/T | 0.45 | ambiguous | 0.3998 | ambiguous | -0.342 | Destabilizing | 0.942 | D | 0.649 | neutral | N | 0.495287295 | None | None | N |
K/V | 0.4557 | ambiguous | 0.4168 | ambiguous | 0.244 | Stabilizing | 0.956 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/W | 0.9424 | likely_pathogenic | 0.9306 | pathogenic | -0.097 | Destabilizing | 0.998 | D | 0.749 | deleterious | None | None | None | None | N |
K/Y | 0.855 | likely_pathogenic | 0.83 | pathogenic | 0.202 | Stabilizing | 0.978 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.