Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1117 | 3574;3575;3576 | chr2:178782243;178782242;178782241 | chr2:179646970;179646969;179646968 |
N2AB | 1117 | 3574;3575;3576 | chr2:178782243;178782242;178782241 | chr2:179646970;179646969;179646968 |
N2A | 1117 | 3574;3575;3576 | chr2:178782243;178782242;178782241 | chr2:179646970;179646969;179646968 |
N2B | 1071 | 3436;3437;3438 | chr2:178782243;178782242;178782241 | chr2:179646970;179646969;179646968 |
Novex-1 | 1071 | 3436;3437;3438 | chr2:178782243;178782242;178782241 | chr2:179646970;179646969;179646968 |
Novex-2 | 1071 | 3436;3437;3438 | chr2:178782243;178782242;178782241 | chr2:179646970;179646969;179646968 |
Novex-3 | 1117 | 3574;3575;3576 | chr2:178782243;178782242;178782241 | chr2:179646970;179646969;179646968 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 1.0 | N | 0.789 | 0.572 | 0.368369118721 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9811 | likely_pathogenic | 0.9832 | pathogenic | -1.215 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/C | 0.9874 | likely_pathogenic | 0.9872 | pathogenic | -1.215 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
K/D | 0.9951 | likely_pathogenic | 0.9961 | pathogenic | -0.29 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
K/E | 0.9738 | likely_pathogenic | 0.978 | pathogenic | -0.094 | Destabilizing | 0.999 | D | 0.585 | neutral | D | 0.609213144 | None | None | N |
K/F | 0.9912 | likely_pathogenic | 0.9922 | pathogenic | -0.883 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
K/G | 0.988 | likely_pathogenic | 0.9894 | pathogenic | -1.627 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
K/H | 0.8502 | likely_pathogenic | 0.853 | pathogenic | -1.821 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
K/I | 0.9534 | likely_pathogenic | 0.956 | pathogenic | -0.1 | Destabilizing | 1.0 | D | 0.879 | deleterious | N | 0.46575444 | None | None | N |
K/L | 0.9362 | likely_pathogenic | 0.9399 | pathogenic | -0.1 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
K/M | 0.9108 | likely_pathogenic | 0.9118 | pathogenic | -0.233 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
K/N | 0.9745 | likely_pathogenic | 0.9772 | pathogenic | -0.862 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | N | 0.471030313 | None | None | N |
K/P | 0.9982 | likely_pathogenic | 0.9988 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
K/Q | 0.8267 | likely_pathogenic | 0.8379 | pathogenic | -0.802 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.484657684 | None | None | N |
K/R | 0.2282 | likely_benign | 0.2402 | benign | -0.628 | Destabilizing | 0.999 | D | 0.623 | neutral | N | 0.421647958 | None | None | N |
K/S | 0.9887 | likely_pathogenic | 0.9897 | pathogenic | -1.703 | Destabilizing | 0.999 | D | 0.624 | neutral | None | None | None | None | N |
K/T | 0.9675 | likely_pathogenic | 0.9703 | pathogenic | -1.257 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.484880147 | None | None | N |
K/V | 0.9395 | likely_pathogenic | 0.9436 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
K/W | 0.9922 | likely_pathogenic | 0.9933 | pathogenic | -0.686 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
K/Y | 0.956 | likely_pathogenic | 0.9575 | pathogenic | -0.376 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.