Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1120 | 3583;3584;3585 | chr2:178782234;178782233;178782232 | chr2:179646961;179646960;179646959 |
N2AB | 1120 | 3583;3584;3585 | chr2:178782234;178782233;178782232 | chr2:179646961;179646960;179646959 |
N2A | 1120 | 3583;3584;3585 | chr2:178782234;178782233;178782232 | chr2:179646961;179646960;179646959 |
N2B | 1074 | 3445;3446;3447 | chr2:178782234;178782233;178782232 | chr2:179646961;179646960;179646959 |
Novex-1 | 1074 | 3445;3446;3447 | chr2:178782234;178782233;178782232 | chr2:179646961;179646960;179646959 |
Novex-2 | 1074 | 3445;3446;3447 | chr2:178782234;178782233;178782232 | chr2:179646961;179646960;179646959 |
Novex-3 | 1120 | 3583;3584;3585 | chr2:178782234;178782233;178782232 | chr2:179646961;179646960;179646959 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.003 | N | 0.233 | 0.171 | 0.651281849334 | gnomAD-4.0.0 | 1.59053E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8566E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6225 | likely_pathogenic | 0.5087 | ambiguous | -0.491 | Destabilizing | 0.165 | N | 0.272 | neutral | N | 0.451134931 | None | None | N |
V/C | 0.951 | likely_pathogenic | 0.9243 | pathogenic | -0.781 | Destabilizing | 0.981 | D | 0.361 | neutral | None | None | None | None | N |
V/D | 0.884 | likely_pathogenic | 0.7969 | pathogenic | -0.172 | Destabilizing | 0.912 | D | 0.449 | neutral | N | 0.483362575 | None | None | N |
V/E | 0.7251 | likely_pathogenic | 0.6056 | pathogenic | -0.264 | Destabilizing | 0.932 | D | 0.427 | neutral | None | None | None | None | N |
V/F | 0.3147 | likely_benign | 0.2575 | benign | -0.604 | Destabilizing | 0.003 | N | 0.233 | neutral | N | 0.50734685 | None | None | N |
V/G | 0.7059 | likely_pathogenic | 0.5939 | pathogenic | -0.629 | Destabilizing | 0.773 | D | 0.421 | neutral | N | 0.419468945 | None | None | N |
V/H | 0.8854 | likely_pathogenic | 0.8097 | pathogenic | -0.084 | Destabilizing | 0.981 | D | 0.45 | neutral | None | None | None | None | N |
V/I | 0.0764 | likely_benign | 0.0737 | benign | -0.268 | Destabilizing | 0.001 | N | 0.205 | neutral | N | 0.460580718 | None | None | N |
V/K | 0.7698 | likely_pathogenic | 0.6386 | pathogenic | -0.496 | Destabilizing | 0.818 | D | 0.422 | neutral | None | None | None | None | N |
V/L | 0.3877 | ambiguous | 0.3365 | benign | -0.268 | Destabilizing | 0.001 | N | 0.146 | neutral | N | 0.481305799 | None | None | N |
V/M | 0.2612 | likely_benign | 0.2225 | benign | -0.47 | Destabilizing | 0.69 | D | 0.36 | neutral | None | None | None | None | N |
V/N | 0.6843 | likely_pathogenic | 0.5617 | ambiguous | -0.338 | Destabilizing | 0.932 | D | 0.437 | neutral | None | None | None | None | N |
V/P | 0.986 | likely_pathogenic | 0.9812 | pathogenic | -0.309 | Destabilizing | 0.932 | D | 0.423 | neutral | None | None | None | None | N |
V/Q | 0.6639 | likely_pathogenic | 0.5508 | ambiguous | -0.523 | Destabilizing | 0.932 | D | 0.417 | neutral | None | None | None | None | N |
V/R | 0.7271 | likely_pathogenic | 0.6108 | pathogenic | -0.002 | Destabilizing | 0.818 | D | 0.443 | neutral | None | None | None | None | N |
V/S | 0.6355 | likely_pathogenic | 0.5124 | ambiguous | -0.73 | Destabilizing | 0.818 | D | 0.402 | neutral | None | None | None | None | N |
V/T | 0.5563 | ambiguous | 0.445 | ambiguous | -0.716 | Destabilizing | 0.388 | N | 0.241 | neutral | None | None | None | None | N |
V/W | 0.9658 | likely_pathogenic | 0.9482 | pathogenic | -0.686 | Destabilizing | 0.981 | D | 0.473 | neutral | None | None | None | None | N |
V/Y | 0.8042 | likely_pathogenic | 0.73 | pathogenic | -0.403 | Destabilizing | 0.527 | D | 0.336 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.