Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1122 | 3589;3590;3591 | chr2:178782228;178782227;178782226 | chr2:179646955;179646954;179646953 |
N2AB | 1122 | 3589;3590;3591 | chr2:178782228;178782227;178782226 | chr2:179646955;179646954;179646953 |
N2A | 1122 | 3589;3590;3591 | chr2:178782228;178782227;178782226 | chr2:179646955;179646954;179646953 |
N2B | 1076 | 3451;3452;3453 | chr2:178782228;178782227;178782226 | chr2:179646955;179646954;179646953 |
Novex-1 | 1076 | 3451;3452;3453 | chr2:178782228;178782227;178782226 | chr2:179646955;179646954;179646953 |
Novex-2 | 1076 | 3451;3452;3453 | chr2:178782228;178782227;178782226 | chr2:179646955;179646954;179646953 |
Novex-3 | 1122 | 3589;3590;3591 | chr2:178782228;178782227;178782226 | chr2:179646955;179646954;179646953 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1189198137 | -1.423 | 1.0 | D | 0.863 | 0.838 | 0.905625399933 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.45E-05 | None | 0 | None | 0 | 0 | 0 |
L/P | rs1189198137 | -1.423 | 1.0 | D | 0.863 | 0.838 | 0.905625399933 | gnomAD-4.0.0 | 1.59054E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77346E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.977 | likely_pathogenic | 0.9693 | pathogenic | -2.239 | Highly Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
L/C | 0.9885 | likely_pathogenic | 0.9805 | pathogenic | -1.488 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -2.132 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
L/E | 0.9976 | likely_pathogenic | 0.9965 | pathogenic | -1.919 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/F | 0.903 | likely_pathogenic | 0.8676 | pathogenic | -1.321 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/G | 0.998 | likely_pathogenic | 0.9973 | pathogenic | -2.751 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
L/H | 0.9959 | likely_pathogenic | 0.9933 | pathogenic | -1.998 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
L/I | 0.2973 | likely_benign | 0.2434 | benign | -0.777 | Destabilizing | 0.999 | D | 0.527 | neutral | N | 0.468719911 | None | None | N |
L/K | 0.9946 | likely_pathogenic | 0.9919 | pathogenic | -1.674 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
L/M | 0.5533 | ambiguous | 0.4839 | ambiguous | -0.712 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
L/N | 0.9983 | likely_pathogenic | 0.9975 | pathogenic | -1.967 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/P | 0.9979 | likely_pathogenic | 0.9971 | pathogenic | -1.244 | Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.655461329 | None | None | N |
L/Q | 0.99 | likely_pathogenic | 0.9851 | pathogenic | -1.831 | Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.655900012 | None | None | N |
L/R | 0.9903 | likely_pathogenic | 0.9855 | pathogenic | -1.432 | Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.671397692 | None | None | N |
L/S | 0.9972 | likely_pathogenic | 0.9959 | pathogenic | -2.681 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/T | 0.9864 | likely_pathogenic | 0.9819 | pathogenic | -2.31 | Highly Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
L/V | 0.3642 | ambiguous | 0.3031 | benign | -1.244 | Destabilizing | 0.999 | D | 0.514 | neutral | N | 0.514658416 | None | None | N |
L/W | 0.9922 | likely_pathogenic | 0.9881 | pathogenic | -1.577 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
L/Y | 0.9938 | likely_pathogenic | 0.9897 | pathogenic | -1.285 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.