Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1131 | 3616;3617;3618 | chr2:178781253;178781252;178781251 | chr2:179645980;179645979;179645978 |
N2AB | 1131 | 3616;3617;3618 | chr2:178781253;178781252;178781251 | chr2:179645980;179645979;179645978 |
N2A | 1131 | 3616;3617;3618 | chr2:178781253;178781252;178781251 | chr2:179645980;179645979;179645978 |
N2B | 1085 | 3478;3479;3480 | chr2:178781253;178781252;178781251 | chr2:179645980;179645979;179645978 |
Novex-1 | 1085 | 3478;3479;3480 | chr2:178781253;178781252;178781251 | chr2:179645980;179645979;179645978 |
Novex-2 | 1085 | 3478;3479;3480 | chr2:178781253;178781252;178781251 | chr2:179645980;179645979;179645978 |
Novex-3 | 1131 | 3616;3617;3618 | chr2:178781253;178781252;178781251 | chr2:179645980;179645979;179645978 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.351 | N | 0.277 | 0.154 | 0.191931220699 | gnomAD-4.0.0 | 1.59101E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76781E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0964 | likely_benign | 0.094 | benign | -0.481 | Destabilizing | 0.004 | N | 0.106 | neutral | None | None | None | None | N |
S/C | 0.196 | likely_benign | 0.1711 | benign | -0.29 | Destabilizing | 0.921 | D | 0.396 | neutral | D | 0.648834498 | None | None | N |
S/D | 0.5999 | likely_pathogenic | 0.6049 | pathogenic | -0.161 | Destabilizing | 0.418 | N | 0.247 | neutral | None | None | None | None | N |
S/E | 0.6543 | likely_pathogenic | 0.6532 | pathogenic | -0.166 | Destabilizing | 0.418 | N | 0.283 | neutral | None | None | None | None | N |
S/F | 0.2084 | likely_benign | 0.2137 | benign | -0.609 | Destabilizing | 0.716 | D | 0.493 | neutral | None | None | None | None | N |
S/G | 0.1888 | likely_benign | 0.1884 | benign | -0.733 | Destabilizing | 0.183 | N | 0.275 | neutral | N | 0.510062823 | None | None | N |
S/H | 0.4276 | ambiguous | 0.4333 | ambiguous | -1.194 | Destabilizing | 0.005 | N | 0.255 | neutral | None | None | None | None | N |
S/I | 0.1664 | likely_benign | 0.1748 | benign | 0.079 | Stabilizing | 0.002 | N | 0.335 | neutral | N | 0.510943594 | None | None | N |
S/K | 0.8757 | likely_pathogenic | 0.8791 | pathogenic | -0.76 | Destabilizing | 0.418 | N | 0.265 | neutral | None | None | None | None | N |
S/L | 0.1189 | likely_benign | 0.1218 | benign | 0.079 | Stabilizing | 0.001 | N | 0.287 | neutral | None | None | None | None | N |
S/M | 0.2053 | likely_benign | 0.2124 | benign | 0.193 | Stabilizing | 0.716 | D | 0.423 | neutral | None | None | None | None | N |
S/N | 0.2236 | likely_benign | 0.2365 | benign | -0.606 | Destabilizing | 0.351 | N | 0.277 | neutral | N | 0.511494936 | None | None | N |
S/P | 0.9653 | likely_pathogenic | 0.9663 | pathogenic | -0.073 | Destabilizing | 0.836 | D | 0.445 | neutral | None | None | None | None | N |
S/Q | 0.6073 | likely_pathogenic | 0.6155 | pathogenic | -0.683 | Destabilizing | 0.836 | D | 0.367 | neutral | None | None | None | None | N |
S/R | 0.8036 | likely_pathogenic | 0.8086 | pathogenic | -0.669 | Destabilizing | 0.523 | D | 0.446 | neutral | N | 0.506290888 | None | None | N |
S/T | 0.0884 | likely_benign | 0.0876 | benign | -0.58 | Destabilizing | 0.007 | N | 0.136 | neutral | N | 0.491666901 | None | None | N |
S/V | 0.1997 | likely_benign | 0.2008 | benign | -0.073 | Destabilizing | 0.049 | N | 0.373 | neutral | None | None | None | None | N |
S/W | 0.4404 | ambiguous | 0.4247 | ambiguous | -0.678 | Destabilizing | 0.983 | D | 0.501 | neutral | None | None | None | None | N |
S/Y | 0.2426 | likely_benign | 0.2455 | benign | -0.407 | Destabilizing | 0.716 | D | 0.49 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.