Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1141 | 3646;3647;3648 | chr2:178781223;178781222;178781221 | chr2:179645950;179645949;179645948 |
N2AB | 1141 | 3646;3647;3648 | chr2:178781223;178781222;178781221 | chr2:179645950;179645949;179645948 |
N2A | 1141 | 3646;3647;3648 | chr2:178781223;178781222;178781221 | chr2:179645950;179645949;179645948 |
N2B | 1095 | 3508;3509;3510 | chr2:178781223;178781222;178781221 | chr2:179645950;179645949;179645948 |
Novex-1 | 1095 | 3508;3509;3510 | chr2:178781223;178781222;178781221 | chr2:179645950;179645949;179645948 |
Novex-2 | 1095 | 3508;3509;3510 | chr2:178781223;178781222;178781221 | chr2:179645950;179645949;179645948 |
Novex-3 | 1141 | 3646;3647;3648 | chr2:178781223;178781222;178781221 | chr2:179645950;179645949;179645948 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | None | 1.0 | D | 0.785 | 0.536 | 0.715311462823 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9806 | likely_pathogenic | 0.9724 | pathogenic | -2.214 | Highly Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
L/C | 0.983 | likely_pathogenic | 0.9725 | pathogenic | -1.359 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/D | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -3.007 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
L/E | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -2.69 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/F | 0.894 | likely_pathogenic | 0.8581 | pathogenic | -1.401 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
L/G | 0.9968 | likely_pathogenic | 0.9955 | pathogenic | -2.779 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
L/H | 0.9983 | likely_pathogenic | 0.9981 | pathogenic | -2.756 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/I | 0.6129 | likely_pathogenic | 0.5281 | ambiguous | -0.501 | Destabilizing | 0.999 | D | 0.648 | neutral | None | None | None | None | N |
L/K | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -1.734 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/M | 0.601 | likely_pathogenic | 0.5229 | ambiguous | -0.706 | Destabilizing | 1.0 | D | 0.785 | deleterious | D | 0.663419089 | None | None | N |
L/N | 0.9992 | likely_pathogenic | 0.9992 | pathogenic | -2.525 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
L/P | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -1.065 | Destabilizing | 1.0 | D | 0.905 | deleterious | D | 0.793669378 | None | None | N |
L/Q | 0.9979 | likely_pathogenic | 0.9975 | pathogenic | -2.078 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | D | 0.793669378 | None | None | N |
L/R | 0.9969 | likely_pathogenic | 0.9967 | pathogenic | -2.083 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | D | 0.793669378 | None | None | N |
L/S | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -2.921 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
L/T | 0.9948 | likely_pathogenic | 0.9925 | pathogenic | -2.437 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
L/V | 0.6854 | likely_pathogenic | 0.5863 | pathogenic | -1.065 | Destabilizing | 0.999 | D | 0.655 | neutral | D | 0.645088725 | None | None | N |
L/W | 0.9951 | likely_pathogenic | 0.9932 | pathogenic | -1.751 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
L/Y | 0.993 | likely_pathogenic | 0.9918 | pathogenic | -1.551 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.