Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1147 | 3664;3665;3666 | chr2:178781205;178781204;178781203 | chr2:179645932;179645931;179645930 |
N2AB | 1147 | 3664;3665;3666 | chr2:178781205;178781204;178781203 | chr2:179645932;179645931;179645930 |
N2A | 1147 | 3664;3665;3666 | chr2:178781205;178781204;178781203 | chr2:179645932;179645931;179645930 |
N2B | 1101 | 3526;3527;3528 | chr2:178781205;178781204;178781203 | chr2:179645932;179645931;179645930 |
Novex-1 | 1101 | 3526;3527;3528 | chr2:178781205;178781204;178781203 | chr2:179645932;179645931;179645930 |
Novex-2 | 1101 | 3526;3527;3528 | chr2:178781205;178781204;178781203 | chr2:179645932;179645931;179645930 |
Novex-3 | 1147 | 3664;3665;3666 | chr2:178781205;178781204;178781203 | chr2:179645932;179645931;179645930 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/I | None | None | 0.698 | N | 0.446 | 0.446 | 0.456462010053 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
F/S | None | None | 0.971 | N | 0.599 | 0.574 | 0.782198002342 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9575 | likely_pathogenic | 0.9496 | pathogenic | -1.549 | Destabilizing | 0.86 | D | 0.517 | neutral | None | None | None | None | I |
F/C | 0.9534 | likely_pathogenic | 0.94 | pathogenic | -0.509 | Destabilizing | 0.997 | D | 0.631 | neutral | N | 0.486669245 | None | None | I |
F/D | 0.9873 | likely_pathogenic | 0.9855 | pathogenic | 0.261 | Stabilizing | 0.993 | D | 0.709 | prob.delet. | None | None | None | None | I |
F/E | 0.9893 | likely_pathogenic | 0.986 | pathogenic | 0.262 | Stabilizing | 0.978 | D | 0.699 | prob.neutral | None | None | None | None | I |
F/G | 0.984 | likely_pathogenic | 0.9804 | pathogenic | -1.803 | Destabilizing | 0.978 | D | 0.677 | prob.neutral | None | None | None | None | I |
F/H | 0.9517 | likely_pathogenic | 0.9432 | pathogenic | -0.311 | Destabilizing | 0.998 | D | 0.541 | neutral | None | None | None | None | I |
F/I | 0.9195 | likely_pathogenic | 0.9046 | pathogenic | -0.854 | Destabilizing | 0.698 | D | 0.446 | neutral | N | 0.458613044 | None | None | I |
F/K | 0.9881 | likely_pathogenic | 0.9862 | pathogenic | -0.351 | Destabilizing | 0.978 | D | 0.688 | prob.neutral | None | None | None | None | I |
F/L | 0.9862 | likely_pathogenic | 0.9824 | pathogenic | -0.854 | Destabilizing | 0.014 | N | 0.211 | neutral | N | 0.443702643 | None | None | I |
F/M | 0.9124 | likely_pathogenic | 0.8959 | pathogenic | -0.486 | Destabilizing | 0.956 | D | 0.509 | neutral | None | None | None | None | I |
F/N | 0.9584 | likely_pathogenic | 0.9502 | pathogenic | -0.152 | Destabilizing | 0.993 | D | 0.703 | prob.neutral | None | None | None | None | I |
F/P | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | -1.07 | Destabilizing | 0.993 | D | 0.698 | prob.neutral | None | None | None | None | I |
F/Q | 0.9822 | likely_pathogenic | 0.9773 | pathogenic | -0.318 | Destabilizing | 0.993 | D | 0.697 | prob.neutral | None | None | None | None | I |
F/R | 0.974 | likely_pathogenic | 0.9672 | pathogenic | 0.274 | Stabilizing | 0.978 | D | 0.709 | prob.delet. | None | None | None | None | I |
F/S | 0.9278 | likely_pathogenic | 0.9104 | pathogenic | -0.982 | Destabilizing | 0.971 | D | 0.599 | neutral | N | 0.409788674 | None | None | I |
F/T | 0.956 | likely_pathogenic | 0.9464 | pathogenic | -0.889 | Destabilizing | 0.956 | D | 0.541 | neutral | None | None | None | None | I |
F/V | 0.8733 | likely_pathogenic | 0.8491 | pathogenic | -1.07 | Destabilizing | 0.698 | D | 0.483 | neutral | N | 0.442779793 | None | None | I |
F/W | 0.9021 | likely_pathogenic | 0.9034 | pathogenic | -0.524 | Destabilizing | 0.998 | D | 0.505 | neutral | None | None | None | None | I |
F/Y | 0.5847 | likely_pathogenic | 0.5596 | ambiguous | -0.507 | Destabilizing | 0.904 | D | 0.487 | neutral | N | 0.484473168 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.