Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1154 | 3685;3686;3687 | chr2:178781184;178781183;178781182 | chr2:179645911;179645910;179645909 |
N2AB | 1154 | 3685;3686;3687 | chr2:178781184;178781183;178781182 | chr2:179645911;179645910;179645909 |
N2A | 1154 | 3685;3686;3687 | chr2:178781184;178781183;178781182 | chr2:179645911;179645910;179645909 |
N2B | 1108 | 3547;3548;3549 | chr2:178781184;178781183;178781182 | chr2:179645911;179645910;179645909 |
Novex-1 | 1108 | 3547;3548;3549 | chr2:178781184;178781183;178781182 | chr2:179645911;179645910;179645909 |
Novex-2 | 1108 | 3547;3548;3549 | chr2:178781184;178781183;178781182 | chr2:179645911;179645910;179645909 |
Novex-3 | 1154 | 3685;3686;3687 | chr2:178781184;178781183;178781182 | chr2:179645911;179645910;179645909 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 1.0 | D | 0.801 | 0.858 | 0.714328772918 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9995 | likely_pathogenic | 0.9996 | pathogenic | -1.838 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
Y/C | 0.9958 | likely_pathogenic | 0.9967 | pathogenic | -1.392 | Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.766369182 | None | None | N |
Y/D | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -2.537 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.801159458 | None | None | N |
Y/E | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -2.287 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
Y/F | 0.5625 | ambiguous | 0.5814 | pathogenic | -0.596 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | D | 0.639383628 | None | None | N |
Y/G | 0.9981 | likely_pathogenic | 0.9983 | pathogenic | -2.283 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
Y/H | 0.9976 | likely_pathogenic | 0.9981 | pathogenic | -1.999 | Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.801785381 | None | None | N |
Y/I | 0.9912 | likely_pathogenic | 0.9904 | pathogenic | -0.37 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
Y/K | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -1.517 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
Y/L | 0.9734 | likely_pathogenic | 0.9712 | pathogenic | -0.37 | Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | N |
Y/M | 0.9953 | likely_pathogenic | 0.9955 | pathogenic | -0.628 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Y/N | 0.9961 | likely_pathogenic | 0.9964 | pathogenic | -2.399 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | D | 0.801159458 | None | None | N |
Y/P | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -0.874 | Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
Y/Q | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -1.904 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/R | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -1.987 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Y/S | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -2.681 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.801159458 | None | None | N |
Y/T | 0.9995 | likely_pathogenic | 0.9996 | pathogenic | -2.279 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
Y/V | 0.9873 | likely_pathogenic | 0.9861 | pathogenic | -0.874 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
Y/W | 0.9596 | likely_pathogenic | 0.9718 | pathogenic | -0.027 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.