Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1156 | 3691;3692;3693 | chr2:178781178;178781177;178781176 | chr2:179645905;179645904;179645903 |
N2AB | 1156 | 3691;3692;3693 | chr2:178781178;178781177;178781176 | chr2:179645905;179645904;179645903 |
N2A | 1156 | 3691;3692;3693 | chr2:178781178;178781177;178781176 | chr2:179645905;179645904;179645903 |
N2B | 1110 | 3553;3554;3555 | chr2:178781178;178781177;178781176 | chr2:179645905;179645904;179645903 |
Novex-1 | 1110 | 3553;3554;3555 | chr2:178781178;178781177;178781176 | chr2:179645905;179645904;179645903 |
Novex-2 | 1110 | 3553;3554;3555 | chr2:178781178;178781177;178781176 | chr2:179645905;179645904;179645903 |
Novex-3 | 1156 | 3691;3692;3693 | chr2:178781178;178781177;178781176 | chr2:179645905;179645904;179645903 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.722 | N | 0.74 | 0.339 | 0.537170616986 | gnomAD-4.0.0 | 2.73646E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59733E-06 | 0 | 0 |
I/V | None | None | 0.003 | N | 0.303 | 0.057 | 0.229924730088 | gnomAD-4.0.0 | 1.59076E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76644E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7979 | likely_pathogenic | 0.7875 | pathogenic | -2.545 | Highly Destabilizing | 0.415 | N | 0.725 | prob.delet. | None | None | None | None | N |
I/C | 0.9579 | likely_pathogenic | 0.9526 | pathogenic | -1.556 | Destabilizing | 0.024 | N | 0.637 | neutral | None | None | None | None | N |
I/D | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -3.279 | Highly Destabilizing | 0.987 | D | 0.853 | deleterious | None | None | None | None | N |
I/E | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -2.958 | Highly Destabilizing | 0.961 | D | 0.851 | deleterious | None | None | None | None | N |
I/F | 0.8303 | likely_pathogenic | 0.836 | pathogenic | -1.508 | Destabilizing | 0.901 | D | 0.702 | prob.neutral | N | 0.452093366 | None | None | N |
I/G | 0.9938 | likely_pathogenic | 0.9939 | pathogenic | -3.149 | Highly Destabilizing | 0.961 | D | 0.833 | deleterious | None | None | None | None | N |
I/H | 0.9992 | likely_pathogenic | 0.9993 | pathogenic | -2.903 | Highly Destabilizing | 0.996 | D | 0.864 | deleterious | None | None | None | None | N |
I/K | 0.9987 | likely_pathogenic | 0.9988 | pathogenic | -1.826 | Destabilizing | 0.961 | D | 0.852 | deleterious | None | None | None | None | N |
I/L | 0.3746 | ambiguous | 0.376 | ambiguous | -0.728 | Destabilizing | 0.19 | N | 0.421 | neutral | N | 0.430233725 | None | None | N |
I/M | 0.3591 | ambiguous | 0.3539 | ambiguous | -0.815 | Destabilizing | 0.901 | D | 0.673 | neutral | N | 0.455541523 | None | None | N |
I/N | 0.996 | likely_pathogenic | 0.9965 | pathogenic | -2.536 | Highly Destabilizing | 0.983 | D | 0.851 | deleterious | N | 0.456219242 | None | None | N |
I/P | 0.9981 | likely_pathogenic | 0.9986 | pathogenic | -1.324 | Destabilizing | 0.987 | D | 0.851 | deleterious | None | None | None | None | N |
I/Q | 0.9982 | likely_pathogenic | 0.9982 | pathogenic | -2.185 | Highly Destabilizing | 0.987 | D | 0.864 | deleterious | None | None | None | None | N |
I/R | 0.9973 | likely_pathogenic | 0.9975 | pathogenic | -1.935 | Destabilizing | 0.961 | D | 0.855 | deleterious | None | None | None | None | N |
I/S | 0.9787 | likely_pathogenic | 0.9792 | pathogenic | -3.065 | Highly Destabilizing | 0.901 | D | 0.797 | deleterious | N | 0.456486004 | None | None | N |
I/T | 0.9234 | likely_pathogenic | 0.9195 | pathogenic | -2.583 | Highly Destabilizing | 0.722 | D | 0.74 | deleterious | N | 0.454464237 | None | None | N |
I/V | 0.082 | likely_benign | 0.0793 | benign | -1.324 | Destabilizing | 0.003 | N | 0.303 | neutral | N | 0.392685548 | None | None | N |
I/W | 0.9984 | likely_pathogenic | 0.9986 | pathogenic | -1.957 | Destabilizing | 0.996 | D | 0.849 | deleterious | None | None | None | None | N |
I/Y | 0.993 | likely_pathogenic | 0.9938 | pathogenic | -1.697 | Destabilizing | 0.961 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.