Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1162 | 3709;3710;3711 | chr2:178781160;178781159;178781158 | chr2:179645887;179645886;179645885 |
N2AB | 1162 | 3709;3710;3711 | chr2:178781160;178781159;178781158 | chr2:179645887;179645886;179645885 |
N2A | 1162 | 3709;3710;3711 | chr2:178781160;178781159;178781158 | chr2:179645887;179645886;179645885 |
N2B | 1116 | 3571;3572;3573 | chr2:178781160;178781159;178781158 | chr2:179645887;179645886;179645885 |
Novex-1 | 1116 | 3571;3572;3573 | chr2:178781160;178781159;178781158 | chr2:179645887;179645886;179645885 |
Novex-2 | 1116 | 3571;3572;3573 | chr2:178781160;178781159;178781158 | chr2:179645887;179645886;179645885 |
Novex-3 | 1162 | 3709;3710;3711 | chr2:178781160;178781159;178781158 | chr2:179645887;179645886;179645885 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs146887683 | 0.219 | 0.006 | N | 0.319 | 0.107 | None | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | I | None | 6.15E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/R | rs146887683 | 0.219 | 0.006 | N | 0.319 | 0.107 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/R | rs146887683 | 0.219 | 0.006 | N | 0.319 | 0.107 | None | gnomAD-4.0.0 | 2.47837E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.38993E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4704 | ambiguous | 0.5041 | ambiguous | 0.488 | Stabilizing | 0.495 | N | 0.545 | neutral | None | None | None | None | I |
H/C | 0.3243 | likely_benign | 0.326 | benign | 0.754 | Stabilizing | 0.995 | D | 0.525 | neutral | None | None | None | None | I |
H/D | 0.4565 | ambiguous | 0.4615 | ambiguous | -0.18 | Destabilizing | 0.642 | D | 0.493 | neutral | D | 0.581653883 | None | None | I |
H/E | 0.4813 | ambiguous | 0.4823 | ambiguous | -0.172 | Destabilizing | 0.543 | D | 0.371 | neutral | None | None | None | None | I |
H/F | 0.1933 | likely_benign | 0.2079 | benign | 1.017 | Stabilizing | 0.007 | N | 0.399 | neutral | None | None | None | None | I |
H/G | 0.5959 | likely_pathogenic | 0.6576 | pathogenic | 0.247 | Stabilizing | 0.828 | D | 0.539 | neutral | None | None | None | None | I |
H/I | 0.3873 | ambiguous | 0.411 | ambiguous | 1.087 | Stabilizing | 0.543 | D | 0.545 | neutral | None | None | None | None | I |
H/K | 0.5294 | ambiguous | 0.5449 | ambiguous | 0.377 | Stabilizing | 0.543 | D | 0.464 | neutral | None | None | None | None | I |
H/L | 0.1307 | likely_benign | 0.1384 | benign | 1.087 | Stabilizing | 0.006 | N | 0.416 | neutral | N | 0.472642579 | None | None | I |
H/M | 0.5284 | ambiguous | 0.548 | ambiguous | 0.78 | Stabilizing | 0.893 | D | 0.555 | neutral | None | None | None | None | I |
H/N | 0.1625 | likely_benign | 0.1725 | benign | 0.307 | Stabilizing | 0.642 | D | 0.389 | neutral | N | 0.508397071 | None | None | I |
H/P | 0.8495 | likely_pathogenic | 0.8694 | pathogenic | 0.912 | Stabilizing | 0.975 | D | 0.559 | neutral | D | 0.581653883 | None | None | I |
H/Q | 0.3209 | likely_benign | 0.3452 | ambiguous | 0.377 | Stabilizing | 0.065 | N | 0.297 | neutral | N | 0.502252575 | None | None | I |
H/R | 0.2634 | likely_benign | 0.2766 | benign | -0.18 | Destabilizing | 0.006 | N | 0.319 | neutral | N | 0.508397071 | None | None | I |
H/S | 0.4209 | ambiguous | 0.4512 | ambiguous | 0.481 | Stabilizing | 0.704 | D | 0.489 | neutral | None | None | None | None | I |
H/T | 0.518 | ambiguous | 0.5474 | ambiguous | 0.582 | Stabilizing | 0.828 | D | 0.535 | neutral | None | None | None | None | I |
H/V | 0.3439 | ambiguous | 0.365 | ambiguous | 0.912 | Stabilizing | 0.543 | D | 0.555 | neutral | None | None | None | None | I |
H/W | 0.3665 | ambiguous | 0.387 | ambiguous | 0.907 | Stabilizing | 0.985 | D | 0.547 | neutral | None | None | None | None | I |
H/Y | 0.0674 | likely_benign | 0.0694 | benign | 1.201 | Stabilizing | 0.006 | N | 0.279 | neutral | N | 0.456845499 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.