Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1164 | 3715;3716;3717 | chr2:178781154;178781153;178781152 | chr2:179645881;179645880;179645879 |
N2AB | 1164 | 3715;3716;3717 | chr2:178781154;178781153;178781152 | chr2:179645881;179645880;179645879 |
N2A | 1164 | 3715;3716;3717 | chr2:178781154;178781153;178781152 | chr2:179645881;179645880;179645879 |
N2B | 1118 | 3577;3578;3579 | chr2:178781154;178781153;178781152 | chr2:179645881;179645880;179645879 |
Novex-1 | 1118 | 3577;3578;3579 | chr2:178781154;178781153;178781152 | chr2:179645881;179645880;179645879 |
Novex-2 | 1118 | 3577;3578;3579 | chr2:178781154;178781153;178781152 | chr2:179645881;179645880;179645879 |
Novex-3 | 1164 | 3715;3716;3717 | chr2:178781154;178781153;178781152 | chr2:179645881;179645880;179645879 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.998 | N | 0.653 | 0.534 | 0.372268306217 | gnomAD-4.0.0 | 1.59081E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
E/V | None | None | 1.0 | N | 0.724 | 0.729 | 0.588653130956 | gnomAD-4.0.0 | 1.59078E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8569E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6775 | likely_pathogenic | 0.6479 | pathogenic | -0.819 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | N | 0.51641753 | None | None | I |
E/C | 0.9924 | likely_pathogenic | 0.9906 | pathogenic | -0.409 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
E/D | 0.6551 | likely_pathogenic | 0.6452 | pathogenic | -0.798 | Destabilizing | 0.434 | N | 0.227 | neutral | N | 0.50625099 | None | None | I |
E/F | 0.9806 | likely_pathogenic | 0.9768 | pathogenic | -0.339 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/G | 0.7994 | likely_pathogenic | 0.7834 | pathogenic | -1.109 | Destabilizing | 0.999 | D | 0.657 | neutral | D | 0.602682885 | None | None | I |
E/H | 0.9545 | likely_pathogenic | 0.9495 | pathogenic | -0.257 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/I | 0.8782 | likely_pathogenic | 0.8608 | pathogenic | -0.049 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
E/K | 0.7306 | likely_pathogenic | 0.7031 | pathogenic | -0.189 | Destabilizing | 0.998 | D | 0.653 | neutral | N | 0.501177259 | None | None | I |
E/L | 0.9417 | likely_pathogenic | 0.9261 | pathogenic | -0.049 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
E/M | 0.8879 | likely_pathogenic | 0.8641 | pathogenic | 0.191 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
E/N | 0.8713 | likely_pathogenic | 0.8667 | pathogenic | -0.714 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/P | 0.9978 | likely_pathogenic | 0.9979 | pathogenic | -0.286 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
E/Q | 0.4954 | ambiguous | 0.4954 | ambiguous | -0.64 | Destabilizing | 0.999 | D | 0.656 | neutral | N | 0.502714098 | None | None | I |
E/R | 0.8817 | likely_pathogenic | 0.8787 | pathogenic | 0.169 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
E/S | 0.7233 | likely_pathogenic | 0.707 | pathogenic | -0.924 | Destabilizing | 0.997 | D | 0.679 | prob.neutral | None | None | None | None | I |
E/T | 0.7786 | likely_pathogenic | 0.7492 | pathogenic | -0.682 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
E/V | 0.7302 | likely_pathogenic | 0.6909 | pathogenic | -0.286 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | N | 0.517252786 | None | None | I |
E/W | 0.9969 | likely_pathogenic | 0.9963 | pathogenic | -0.038 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
E/Y | 0.9792 | likely_pathogenic | 0.9755 | pathogenic | -0.067 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.