Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1165 | 3718;3719;3720 | chr2:178781151;178781150;178781149 | chr2:179645878;179645877;179645876 |
N2AB | 1165 | 3718;3719;3720 | chr2:178781151;178781150;178781149 | chr2:179645878;179645877;179645876 |
N2A | 1165 | 3718;3719;3720 | chr2:178781151;178781150;178781149 | chr2:179645878;179645877;179645876 |
N2B | 1119 | 3580;3581;3582 | chr2:178781151;178781150;178781149 | chr2:179645878;179645877;179645876 |
Novex-1 | 1119 | 3580;3581;3582 | chr2:178781151;178781150;178781149 | chr2:179645878;179645877;179645876 |
Novex-2 | 1119 | 3580;3581;3582 | chr2:178781151;178781150;178781149 | chr2:179645878;179645877;179645876 |
Novex-3 | 1165 | 3718;3719;3720 | chr2:178781151;178781150;178781149 | chr2:179645878;179645877;179645876 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | None | N | 0.253 | 0.096 | 0.144782658237 | gnomAD-4.0.0 | 1.59087E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85701E-06 | 0 | 0 |
T/N | rs762456074 | -0.58 | 0.484 | N | 0.51 | 0.105 | 0.21737058555 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.82E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0786 | likely_benign | 0.0783 | benign | -0.836 | Destabilizing | None | N | 0.103 | neutral | N | 0.323625348 | None | None | I |
T/C | 0.45 | ambiguous | 0.4461 | ambiguous | -0.538 | Destabilizing | 0.791 | D | 0.507 | neutral | None | None | None | None | I |
T/D | 0.5508 | ambiguous | 0.574 | pathogenic | -0.032 | Destabilizing | 0.262 | N | 0.537 | neutral | None | None | None | None | I |
T/E | 0.4338 | ambiguous | 0.4478 | ambiguous | 0.018 | Stabilizing | 0.149 | N | 0.544 | neutral | None | None | None | None | I |
T/F | 0.2712 | likely_benign | 0.2856 | benign | -0.79 | Destabilizing | 0.38 | N | 0.613 | neutral | None | None | None | None | I |
T/G | 0.3774 | ambiguous | 0.4015 | ambiguous | -1.132 | Destabilizing | 0.081 | N | 0.582 | neutral | None | None | None | None | I |
T/H | 0.3966 | ambiguous | 0.4185 | ambiguous | -1.27 | Destabilizing | 0.935 | D | 0.575 | neutral | None | None | None | None | I |
T/I | 0.1028 | likely_benign | 0.1005 | benign | -0.125 | Destabilizing | None | N | 0.253 | neutral | N | 0.431331284 | None | None | I |
T/K | 0.3351 | likely_benign | 0.3474 | ambiguous | -0.52 | Destabilizing | 0.149 | N | 0.542 | neutral | None | None | None | None | I |
T/L | 0.1072 | likely_benign | 0.1052 | benign | -0.125 | Destabilizing | 0.012 | N | 0.455 | neutral | None | None | None | None | I |
T/M | 0.0889 | likely_benign | 0.0886 | benign | -0.107 | Destabilizing | 0.38 | N | 0.516 | neutral | None | None | None | None | I |
T/N | 0.1752 | likely_benign | 0.1953 | benign | -0.624 | Destabilizing | 0.484 | N | 0.51 | neutral | N | 0.486100735 | None | None | I |
T/P | 0.8874 | likely_pathogenic | 0.9081 | pathogenic | -0.329 | Destabilizing | 0.484 | N | 0.534 | neutral | N | 0.511578919 | None | None | I |
T/Q | 0.3287 | likely_benign | 0.3447 | ambiguous | -0.663 | Destabilizing | 0.555 | D | 0.531 | neutral | None | None | None | None | I |
T/R | 0.2835 | likely_benign | 0.3021 | benign | -0.388 | Destabilizing | 0.555 | D | 0.538 | neutral | None | None | None | None | I |
T/S | 0.1425 | likely_benign | 0.1502 | benign | -0.941 | Destabilizing | 0.027 | N | 0.445 | neutral | N | 0.444151541 | None | None | I |
T/V | 0.1004 | likely_benign | 0.0959 | benign | -0.329 | Destabilizing | None | N | 0.091 | neutral | None | None | None | None | I |
T/W | 0.7647 | likely_pathogenic | 0.7701 | pathogenic | -0.756 | Destabilizing | 0.935 | D | 0.612 | neutral | None | None | None | None | I |
T/Y | 0.3935 | ambiguous | 0.4039 | ambiguous | -0.484 | Destabilizing | 0.555 | D | 0.611 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.