Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1166 | 3721;3722;3723 | chr2:178781148;178781147;178781146 | chr2:179645875;179645874;179645873 |
N2AB | 1166 | 3721;3722;3723 | chr2:178781148;178781147;178781146 | chr2:179645875;179645874;179645873 |
N2A | 1166 | 3721;3722;3723 | chr2:178781148;178781147;178781146 | chr2:179645875;179645874;179645873 |
N2B | 1120 | 3583;3584;3585 | chr2:178781148;178781147;178781146 | chr2:179645875;179645874;179645873 |
Novex-1 | 1120 | 3583;3584;3585 | chr2:178781148;178781147;178781146 | chr2:179645875;179645874;179645873 |
Novex-2 | 1120 | 3583;3584;3585 | chr2:178781148;178781147;178781146 | chr2:179645875;179645874;179645873 |
Novex-3 | 1166 | 3721;3722;3723 | chr2:178781148;178781147;178781146 | chr2:179645875;179645874;179645873 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs374543837 | -0.79 | 0.89 | N | 0.692 | 0.411 | None | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.82E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0964 | likely_benign | 0.0983 | benign | -0.544 | Destabilizing | 0.006 | N | 0.275 | neutral | N | 0.51269278 | None | None | I |
S/C | 0.2326 | likely_benign | 0.2349 | benign | -0.401 | Destabilizing | 0.997 | D | 0.658 | neutral | N | 0.50731666 | None | None | I |
S/D | 0.8092 | likely_pathogenic | 0.8521 | pathogenic | 0.465 | Stabilizing | 0.978 | D | 0.488 | neutral | None | None | None | None | I |
S/E | 0.6972 | likely_pathogenic | 0.7492 | pathogenic | 0.426 | Stabilizing | 0.86 | D | 0.475 | neutral | None | None | None | None | I |
S/F | 0.3009 | likely_benign | 0.3546 | ambiguous | -0.963 | Destabilizing | 0.89 | D | 0.692 | prob.neutral | N | 0.505956598 | None | None | I |
S/G | 0.2362 | likely_benign | 0.2617 | benign | -0.725 | Destabilizing | 0.559 | D | 0.513 | neutral | None | None | None | None | I |
S/H | 0.5531 | ambiguous | 0.6033 | pathogenic | -1.12 | Destabilizing | 0.956 | D | 0.677 | prob.neutral | None | None | None | None | I |
S/I | 0.2731 | likely_benign | 0.3146 | benign | -0.187 | Destabilizing | 0.956 | D | 0.662 | neutral | None | None | None | None | I |
S/K | 0.8524 | likely_pathogenic | 0.8877 | pathogenic | -0.367 | Destabilizing | 0.86 | D | 0.472 | neutral | None | None | None | None | I |
S/L | 0.1774 | likely_benign | 0.2076 | benign | -0.187 | Destabilizing | 0.754 | D | 0.587 | neutral | None | None | None | None | I |
S/M | 0.2793 | likely_benign | 0.3058 | benign | -0.13 | Destabilizing | 0.998 | D | 0.67 | neutral | None | None | None | None | I |
S/N | 0.3735 | ambiguous | 0.44 | ambiguous | -0.259 | Destabilizing | 0.978 | D | 0.533 | neutral | None | None | None | None | I |
S/P | 0.9391 | likely_pathogenic | 0.971 | pathogenic | -0.275 | Destabilizing | 0.97 | D | 0.679 | prob.neutral | D | 0.615156785 | None | None | I |
S/Q | 0.658 | likely_pathogenic | 0.7023 | pathogenic | -0.385 | Destabilizing | 0.978 | D | 0.529 | neutral | None | None | None | None | I |
S/R | 0.7789 | likely_pathogenic | 0.8245 | pathogenic | -0.263 | Destabilizing | 0.978 | D | 0.677 | prob.neutral | None | None | None | None | I |
S/T | 0.0937 | likely_benign | 0.1023 | benign | -0.349 | Destabilizing | 0.822 | D | 0.511 | neutral | N | 0.445060701 | None | None | I |
S/V | 0.2277 | likely_benign | 0.2536 | benign | -0.275 | Destabilizing | 0.754 | D | 0.605 | neutral | None | None | None | None | I |
S/W | 0.5964 | likely_pathogenic | 0.6481 | pathogenic | -0.954 | Destabilizing | 0.994 | D | 0.739 | prob.delet. | None | None | None | None | I |
S/Y | 0.3223 | likely_benign | 0.3712 | ambiguous | -0.66 | Destabilizing | 0.032 | N | 0.537 | neutral | N | 0.511706 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.