Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1167 | 3724;3725;3726 | chr2:178781145;178781144;178781143 | chr2:179645872;179645871;179645870 |
N2AB | 1167 | 3724;3725;3726 | chr2:178781145;178781144;178781143 | chr2:179645872;179645871;179645870 |
N2A | 1167 | 3724;3725;3726 | chr2:178781145;178781144;178781143 | chr2:179645872;179645871;179645870 |
N2B | 1121 | 3586;3587;3588 | chr2:178781145;178781144;178781143 | chr2:179645872;179645871;179645870 |
Novex-1 | 1121 | 3586;3587;3588 | chr2:178781145;178781144;178781143 | chr2:179645872;179645871;179645870 |
Novex-2 | 1121 | 3586;3587;3588 | chr2:178781145;178781144;178781143 | chr2:179645872;179645871;179645870 |
Novex-3 | 1167 | 3724;3725;3726 | chr2:178781145;178781144;178781143 | chr2:179645872;179645871;179645870 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1248484876 | None | 0.946 | N | 0.735 | 0.429 | 0.349870743963 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/T | rs1248484876 | None | 0.946 | N | 0.735 | 0.429 | 0.349870743963 | gnomAD-4.0.0 | 6.57125E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46985E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6806 | likely_pathogenic | 0.679 | pathogenic | -0.839 | Destabilizing | 0.998 | D | 0.817 | deleterious | None | None | None | None | I |
A/D | 0.8431 | likely_pathogenic | 0.83 | pathogenic | -0.752 | Destabilizing | 0.921 | D | 0.813 | deleterious | None | None | None | None | I |
A/E | 0.7982 | likely_pathogenic | 0.8003 | pathogenic | -0.672 | Destabilizing | 0.035 | N | 0.46 | neutral | N | 0.513213673 | None | None | I |
A/F | 0.666 | likely_pathogenic | 0.7157 | pathogenic | -0.633 | Destabilizing | 0.993 | D | 0.927 | deleterious | None | None | None | None | I |
A/G | 0.3614 | ambiguous | 0.3527 | ambiguous | -1.091 | Destabilizing | 0.834 | D | 0.589 | neutral | N | 0.519803724 | None | None | I |
A/H | 0.8998 | likely_pathogenic | 0.9119 | pathogenic | -1.309 | Destabilizing | 0.994 | D | 0.909 | deleterious | None | None | None | None | I |
A/I | 0.5794 | likely_pathogenic | 0.634 | pathogenic | 0.203 | Stabilizing | 0.979 | D | 0.889 | deleterious | None | None | None | None | I |
A/K | 0.9533 | likely_pathogenic | 0.9581 | pathogenic | -0.807 | Destabilizing | 0.921 | D | 0.806 | deleterious | None | None | None | None | I |
A/L | 0.521 | ambiguous | 0.5575 | ambiguous | 0.203 | Stabilizing | 0.87 | D | 0.772 | deleterious | None | None | None | None | I |
A/M | 0.5639 | ambiguous | 0.6053 | pathogenic | -0.013 | Destabilizing | 0.998 | D | 0.876 | deleterious | None | None | None | None | I |
A/N | 0.8285 | likely_pathogenic | 0.8382 | pathogenic | -0.77 | Destabilizing | 0.959 | D | 0.907 | deleterious | None | None | None | None | I |
A/P | 0.9959 | likely_pathogenic | 0.9972 | pathogenic | -0.057 | Destabilizing | 0.973 | D | 0.889 | deleterious | D | 0.55238336 | None | None | I |
A/Q | 0.8283 | likely_pathogenic | 0.8359 | pathogenic | -0.714 | Destabilizing | 0.921 | D | 0.889 | deleterious | None | None | None | None | I |
A/R | 0.9034 | likely_pathogenic | 0.9144 | pathogenic | -0.79 | Destabilizing | 0.959 | D | 0.889 | deleterious | None | None | None | None | I |
A/S | 0.1792 | likely_benign | 0.1746 | benign | -1.27 | Destabilizing | 0.716 | D | 0.581 | neutral | N | 0.465881456 | None | None | I |
A/T | 0.1936 | likely_benign | 0.2036 | benign | -1.05 | Destabilizing | 0.946 | D | 0.735 | prob.delet. | N | 0.478300395 | None | None | I |
A/V | 0.2806 | likely_benign | 0.3085 | benign | -0.057 | Destabilizing | 0.834 | D | 0.642 | neutral | N | 0.498641604 | None | None | I |
A/W | 0.9682 | likely_pathogenic | 0.9728 | pathogenic | -1.118 | Destabilizing | 0.998 | D | 0.893 | deleterious | None | None | None | None | I |
A/Y | 0.8551 | likely_pathogenic | 0.8788 | pathogenic | -0.582 | Destabilizing | 0.998 | D | 0.925 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.