Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1292 | 4099;4100;4101 | chr2:178779318;178779317;178779316 | chr2:179644045;179644044;179644043 |
N2AB | 1292 | 4099;4100;4101 | chr2:178779318;178779317;178779316 | chr2:179644045;179644044;179644043 |
N2A | 1292 | 4099;4100;4101 | chr2:178779318;178779317;178779316 | chr2:179644045;179644044;179644043 |
N2B | 1246 | 3961;3962;3963 | chr2:178779318;178779317;178779316 | chr2:179644045;179644044;179644043 |
Novex-1 | 1246 | 3961;3962;3963 | chr2:178779318;178779317;178779316 | chr2:179644045;179644044;179644043 |
Novex-2 | 1246 | 3961;3962;3963 | chr2:178779318;178779317;178779316 | chr2:179644045;179644044;179644043 |
Novex-3 | 1292 | 4099;4100;4101 | chr2:178779318;178779317;178779316 | chr2:179644045;179644044;179644043 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | None | None | 0.89 | N | 0.613 | 0.357 | 0.654740151078 | gnomAD-4.0.0 | 1.20083E-06 | None | None | None | None | N | None | 0 | 0 | None | 1.94401E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1121 | likely_benign | 0.1187 | benign | -0.57 | Destabilizing | 0.006 | N | 0.318 | neutral | N | 0.452380774 | None | None | N |
G/C | 0.2368 | likely_benign | 0.2395 | benign | -0.998 | Destabilizing | 0.994 | D | 0.664 | neutral | None | None | None | None | N |
G/D | 0.5487 | ambiguous | 0.5808 | pathogenic | -0.541 | Destabilizing | 0.956 | D | 0.605 | neutral | None | None | None | None | N |
G/E | 0.4417 | ambiguous | 0.4639 | ambiguous | -0.656 | Destabilizing | 0.942 | D | 0.588 | neutral | N | 0.42430115 | None | None | N |
G/F | 0.6739 | likely_pathogenic | 0.7046 | pathogenic | -1.157 | Destabilizing | 0.978 | D | 0.685 | prob.neutral | None | None | None | None | N |
G/H | 0.5422 | ambiguous | 0.5961 | pathogenic | -0.907 | Destabilizing | 0.998 | D | 0.642 | neutral | None | None | None | None | N |
G/I | 0.2731 | likely_benign | 0.3019 | benign | -0.454 | Destabilizing | 0.956 | D | 0.679 | prob.neutral | None | None | None | None | N |
G/K | 0.6211 | likely_pathogenic | 0.6535 | pathogenic | -0.814 | Destabilizing | 0.956 | D | 0.587 | neutral | None | None | None | None | N |
G/L | 0.4927 | ambiguous | 0.5575 | ambiguous | -0.454 | Destabilizing | 0.915 | D | 0.615 | neutral | None | None | None | None | N |
G/M | 0.5204 | ambiguous | 0.5759 | pathogenic | -0.429 | Destabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | N |
G/N | 0.4577 | ambiguous | 0.5118 | ambiguous | -0.485 | Destabilizing | 0.956 | D | 0.625 | neutral | None | None | None | None | N |
G/P | 0.9677 | likely_pathogenic | 0.9731 | pathogenic | -0.455 | Destabilizing | 0.978 | D | 0.65 | neutral | None | None | None | None | N |
G/Q | 0.4565 | ambiguous | 0.4974 | ambiguous | -0.743 | Destabilizing | 0.978 | D | 0.654 | neutral | None | None | None | None | N |
G/R | 0.4201 | ambiguous | 0.4444 | ambiguous | -0.475 | Destabilizing | 0.97 | D | 0.651 | neutral | N | 0.408037412 | None | None | N |
G/S | 0.0983 | likely_benign | 0.1069 | benign | -0.778 | Destabilizing | 0.193 | N | 0.375 | neutral | None | None | None | None | N |
G/T | 0.1509 | likely_benign | 0.1776 | benign | -0.808 | Destabilizing | 0.754 | D | 0.564 | neutral | None | None | None | None | N |
G/V | 0.1809 | likely_benign | 0.2032 | benign | -0.455 | Destabilizing | 0.89 | D | 0.613 | neutral | N | 0.416883885 | None | None | N |
G/W | 0.6414 | likely_pathogenic | 0.6619 | pathogenic | -1.336 | Destabilizing | 0.998 | D | 0.647 | neutral | None | None | None | None | N |
G/Y | 0.6124 | likely_pathogenic | 0.6389 | pathogenic | -0.948 | Destabilizing | 0.993 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.