Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1311 | 4156;4157;4158 | chr2:178779261;178779260;178779259 | chr2:179643988;179643987;179643986 |
N2AB | 1311 | 4156;4157;4158 | chr2:178779261;178779260;178779259 | chr2:179643988;179643987;179643986 |
N2A | 1311 | 4156;4157;4158 | chr2:178779261;178779260;178779259 | chr2:179643988;179643987;179643986 |
N2B | 1265 | 4018;4019;4020 | chr2:178779261;178779260;178779259 | chr2:179643988;179643987;179643986 |
Novex-1 | 1265 | 4018;4019;4020 | chr2:178779261;178779260;178779259 | chr2:179643988;179643987;179643986 |
Novex-2 | 1265 | 4018;4019;4020 | chr2:178779261;178779260;178779259 | chr2:179643988;179643987;179643986 |
Novex-3 | 1311 | 4156;4157;4158 | chr2:178779261;178779260;178779259 | chr2:179643988;179643987;179643986 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | None | None | 1.0 | N | 0.703 | 0.635 | 0.643426271191 | gnomAD-4.0.0 | 6.84211E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9942E-07 | 0 | 0 |
H/R | None | None | 1.0 | N | 0.644 | 0.552 | 0.423480098753 | gnomAD-4.0.0 | 1.36842E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31895E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.5719 | likely_pathogenic | 0.6291 | pathogenic | -0.649 | Destabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | I |
H/C | 0.4456 | ambiguous | 0.468 | ambiguous | 0.043 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
H/D | 0.5109 | ambiguous | 0.5484 | ambiguous | -0.174 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | N | 0.385356097 | None | None | I |
H/E | 0.6242 | likely_pathogenic | 0.6783 | pathogenic | -0.077 | Destabilizing | 0.999 | D | 0.521 | neutral | None | None | None | None | I |
H/F | 0.4899 | ambiguous | 0.5283 | ambiguous | 0.487 | Stabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
H/G | 0.685 | likely_pathogenic | 0.7368 | pathogenic | -1.022 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | I |
H/I | 0.5413 | ambiguous | 0.6038 | pathogenic | 0.376 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
H/K | 0.6521 | likely_pathogenic | 0.7131 | pathogenic | -0.403 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
H/L | 0.2463 | likely_benign | 0.2787 | benign | 0.376 | Stabilizing | 1.0 | D | 0.698 | prob.neutral | N | 0.472316171 | None | None | I |
H/M | 0.72 | likely_pathogenic | 0.7719 | pathogenic | 0.168 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
H/N | 0.1969 | likely_benign | 0.2269 | benign | -0.473 | Destabilizing | 0.999 | D | 0.515 | neutral | N | 0.447789381 | None | None | I |
H/P | 0.5826 | likely_pathogenic | 0.6451 | pathogenic | 0.057 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.443067579 | None | None | I |
H/Q | 0.3843 | ambiguous | 0.4431 | ambiguous | -0.245 | Destabilizing | 1.0 | D | 0.648 | neutral | N | 0.444700985 | None | None | I |
H/R | 0.3122 | likely_benign | 0.3708 | ambiguous | -0.922 | Destabilizing | 1.0 | D | 0.644 | neutral | N | 0.435329303 | None | None | I |
H/S | 0.3756 | ambiguous | 0.422 | ambiguous | -0.591 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
H/T | 0.4854 | ambiguous | 0.5574 | ambiguous | -0.377 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
H/V | 0.4864 | ambiguous | 0.5484 | ambiguous | 0.057 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
H/W | 0.6629 | likely_pathogenic | 0.686 | pathogenic | 0.797 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
H/Y | 0.2041 | likely_benign | 0.2222 | benign | 0.911 | Stabilizing | 0.999 | D | 0.547 | neutral | N | 0.486766999 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.